Homologs in group_51

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09045 FBDBKF_09045 23.8 Morganella morganii S1 - Fimbria A protein
EHELCC_10365 EHELCC_10365 23.8 Morganella morganii S2 - Fimbria A protein
NLDBIP_10710 NLDBIP_10710 23.8 Morganella morganii S4 - Fimbria A protein
LHKJJB_10645 LHKJJB_10645 23.8 Morganella morganii S3 - Fimbria A protein
HKOGLL_13705 HKOGLL_13705 23.8 Morganella morganii S5 - Fimbria A protein
F4V73_RS10925 F4V73_RS10925 23.3 Morganella psychrotolerans - fimbrial protein
PMI_RS01230 PMI_RS01230 19.8 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS01275 PMI_RS01275 23.8 Proteus mirabilis HI4320 mrpA MR/P fimbria major subunit MrpA
PMI_RS01430 PMI_RS01430 23.0 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS01455 PMI_RS01455 19.1 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS09265 PMI_RS09265 22.4 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10950 PMI_RS10950 20.8 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10955 PMI_RS10955 19.0 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_51

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_51

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37921 6.37e-08 53 23 8 197 1 fimA Type-1 fimbrial protein, A chain Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q04681 3.69e-07 51 24 7 169 1 pmfA Major fimbrial subunit Proteus mirabilis (strain HI4320)
P42185 3.87e-07 51 24 6 168 3 prsH PRS fimbrial minor pilin protein Escherichia coli
Q03011 1.1e-06 50 25 7 177 1 mrpA Major MR/P fimbria protein Proteus mirabilis (strain HI4320)
P37920 3.66e-06 48 23 9 197 3 fimA Type-1 fimbrial protein, A chain Salmonella typhi
P55223 3.8e-05 45 23 7 173 3 None Fimbrial subunit type 1 Salmonella typhimurium
Q47223 0.000113 44 25 6 161 1 fimA Type-1 fimbrial protein, A chain Escherichia coli
P13421 0.00022 43 24 6 174 1 smfA Fimbria A protein Serratia marcescens
P12903 0.000472 42 26 6 140 1 fim Fimbrial subunit type 1 Klebsiella pneumoniae

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01435
Feature type CDS
Gene -
Product fimbrial protein
Location 353722 - 354294 (strand: 1)
Length 573 (nucleotides) / 190 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_51
Orthogroup size 14
N. genomes 7

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MAIYRRIGLQVISSLLSLISSTALAFDPKVIEHEGSTYLVGSVISTPCSIVMSNRYQTVDFSSLTLAMLSSKEKREQQTLPFEIELRDCGSIYTSIDSKTWMIRFDGQSVSNINAFILQGTSKGLGVSVLDNNKNALIPGETYPLFDSVLRQDKSGQILYLRYFLRLELTGEPLRAGDYQGLVRFFIHYQ

Flanking regions ( +/- flanking 50bp)

GAAATAAACCAGCTAAAGCTGAAGATTCTATTTATATAATGGAGAAGAAAGTGGCTATTTATCGACGTATAGGATTGCAAGTAATTAGCAGTCTTTTGTCACTTATTTCTAGTACAGCATTGGCTTTCGATCCTAAAGTTATTGAGCATGAAGGAAGTACTTATCTAGTGGGTAGTGTTATCTCAACTCCTTGTTCTATTGTAATGTCAAATCGTTATCAAACGGTTGATTTTTCTTCTTTAACTTTAGCTATGTTATCAAGCAAAGAAAAACGCGAACAGCAGACTTTACCATTTGAAATAGAACTTCGTGACTGTGGCAGCATTTACACGTCAATTGACAGCAAAACATGGATGATACGTTTTGATGGACAGAGCGTAAGTAATATCAATGCATTTATCTTGCAAGGCACATCTAAAGGTTTAGGGGTTTCTGTTCTAGATAATAATAAAAATGCATTAATACCAGGAGAAACATATCCTTTATTCGATAGCGTATTACGACAAGATAAATCGGGACAAATCCTCTATCTGCGTTACTTCCTTAGGCTAGAACTCACCGGAGAACCTTTACGAGCTGGAGATTACCAAGGACTGGTTCGTTTTTTTATCCATTATCAATAAAGGTAGATGCATTTTCTTAGGCTCTAATGAATAAAGTATTTTATTACCTC