Homologs in group_181

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8 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06330 FBDBKF_06330 100.0 Morganella morganii S1 tolC outer membrane channel protein TolC
EHELCC_09375 EHELCC_09375 100.0 Morganella morganii S2 tolC outer membrane channel protein TolC
NLDBIP_09755 NLDBIP_09755 100.0 Morganella morganii S4 tolC outer membrane channel protein TolC
LHKJJB_08000 LHKJJB_08000 100.0 Morganella morganii S3 tolC outer membrane channel protein TolC
F4V73_RS09460 F4V73_RS09460 18.9 Morganella psychrotolerans - TolC family protein
F4V73_RS15590 F4V73_RS15590 89.6 Morganella psychrotolerans tolC outer membrane channel protein TolC
PMI_RS06115 PMI_RS06115 26.7 Proteus mirabilis HI4320 - TolC family protein
PMI_RS11620 PMI_RS11620 71.1 Proteus mirabilis HI4320 tolC outer membrane channel protein TolC

Distribution of the homologs in the orthogroup group_181

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_181

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q54001 0.0 588 64 0 453 1 tolC Outer membrane protein TolC Salmonella enteritidis
P02930 0.0 567 63 1 456 1 tolC Outer membrane protein TolC Escherichia coli (strain K12)
Q9K2Y1 1.13e-126 377 46 3 436 1 tolC Outer membrane protein TolC Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q03027 3.77e-30 125 27 11 448 3 aprF Alkaline protease secretion protein AprF Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P23598 4.51e-29 122 26 10 456 3 prtF Proteases secretion protein PrtF Dickeya chrysanthemi
Q8G0Y6 5.01e-15 80 24 6 411 1 bepC Outer membrane efflux protein BepC Brucella suis biovar 1 (strain 1330)
P13509 0.000238 47 24 12 325 1 czcC Cobalt-zinc-cadmium resistance protein CzcC Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_07550
Feature type CDS
Gene tolC
Product outer membrane channel protein TolC
Location 115411 - 116775 (strand: -1)
Length 1365 (nucleotides) / 454 (amino acids)

Contig

Accession ZDB_684
Length 217237 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_181
Orthogroup size 9
N. genomes 7

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Genomic region

Domains

PF02321 Outer membrane efflux protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1538 Cell wall/membrane/envelope biogenesis (M) M Outer membrane protein TolC

Kegg Ortholog Annotation(s)

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG044140 outer membrane channel protein TolC VF1029 Nutritional/Metabolic factor

Protein Sequence

MKKLLSLLIAVSVAGFSSVTQAEDLLQVYQKAKETNPTLRQTQAERNQAFEKINEARSPLLPQLGLSGGYDYNTGYRDNSNQSNNALNAQLKLTQTIFDMSKWRQLNLQEQTAGISDITFQSAQQQLIVDTAVAYFNVLRALDTLSFVQAQKEAVYRQLDQTTQRFNVGLVAITDVQNARANYDSVLAQEVAGRNDVENAIEALRQVSGIYYSELASLDVNRFKTNAPDAIEALLKEAQERNLNLLGATLSRNLAKEQISLAESGHYPTVNLSAGTGVTNTDYSGNGYPNGRPNNSYAGQSTIGVNVSIPLYTGGAVSSQVDQAQYGYTAASEKLEATLRQVVQTTRSSYNNINASISSVNAYKQVVTSAESSLDATEAGYQVGTRTIVDVLNATTTLYEAKKSLSNARYDYLINQLYIGQARGTLNEDDILRLNQVLGKTISTSPASVAPTTR

Flanking regions ( +/- flanking 50bp)

GCTTCCCGTGAGGCAACTGACAGATTAGCGCTGTGCAAAAAGGAATCCTAATGAAGAAACTGCTTTCTCTTCTCATTGCTGTGAGTGTGGCAGGTTTCAGCTCTGTCACCCAGGCTGAAGACCTCCTGCAGGTTTATCAAAAAGCGAAAGAGACCAACCCGACCCTCCGTCAGACTCAGGCTGAACGTAACCAGGCTTTCGAAAAAATTAACGAAGCCCGCAGTCCGTTACTGCCGCAGTTAGGTTTAAGCGGGGGTTATGACTATAACACCGGTTACCGTGATAACAGTAACCAGAGCAATAATGCACTGAATGCACAGCTGAAACTGACTCAGACAATTTTTGACATGAGCAAATGGCGTCAGCTGAACCTGCAGGAACAAACTGCCGGGATCAGCGATATCACATTCCAGAGTGCCCAACAGCAGCTGATTGTGGATACCGCCGTTGCTTACTTTAATGTTCTGCGCGCGCTGGATACCCTGTCTTTCGTACAGGCACAGAAAGAAGCCGTCTACCGCCAGCTGGATCAGACCACTCAGCGTTTCAATGTCGGTCTGGTAGCCATTACTGACGTACAGAACGCCCGCGCTAACTACGACAGTGTTCTGGCTCAGGAAGTCGCCGGCCGTAATGATGTCGAAAACGCCATTGAAGCACTGCGTCAGGTGAGCGGTATTTATTACAGCGAATTAGCCTCCCTGGATGTGAACCGCTTTAAAACCAATGCCCCGGATGCCATCGAAGCCCTGCTGAAAGAAGCACAGGAACGTAACCTGAACCTGCTGGGTGCCACACTGAGCCGTAATCTGGCGAAAGAGCAAATCAGCCTGGCGGAATCCGGTCACTATCCGACTGTAAACCTGAGTGCCGGCACAGGCGTAACCAACACCGATTACAGCGGCAACGGCTACCCTAACGGCCGCCCAAATAACAGCTACGCCGGTCAGAGCACCATCGGCGTGAACGTCAGTATCCCGCTGTACACCGGTGGTGCTGTGTCATCACAGGTTGATCAGGCTCAGTACGGCTATACCGCTGCCAGCGAAAAACTGGAAGCGACACTGCGTCAGGTTGTTCAGACCACCCGCTCTTCTTACAACAATATCAACGCCTCAATCAGCAGCGTGAACGCCTACAAACAGGTTGTGACCTCTGCGGAAAGCTCACTCGATGCAACCGAAGCCGGTTATCAGGTGGGTACGCGTACGATTGTGGATGTGCTGAACGCCACCACTACCCTGTATGAAGCGAAGAAAAGTCTGTCCAACGCCCGTTATGACTATCTGATTAACCAGCTTTATATCGGTCAGGCACGCGGTACGCTGAATGAAGACGATATCCTGCGCCTCAACCAGGTGCTGGGTAAAACCATCTCCACATCACCGGCTTCCGTGGCTCCGACCACCCGCTGATCCTGATGTTTGTATGATAAGAACCCGCCTTCCGGCGGGTTTTTTTATAC