Homologs in group_308

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08900 FBDBKF_08900 38.5 Morganella morganii S1 - Integrase catalytic domain-containing protein
EHELCC_12625 EHELCC_12625 38.5 Morganella morganii S2 - Integrase catalytic domain-containing protein
NLDBIP_12965 NLDBIP_12965 38.5 Morganella morganii S4 - Integrase catalytic domain-containing protein
LHKJJB_13590 LHKJJB_13590 38.5 Morganella morganii S3 - Integrase catalytic domain-containing protein
HKOGLL_11440 HKOGLL_11440 38.5 Morganella morganii S5 - Integrase catalytic domain-containing protein
F4V73_RS01605 F4V73_RS01605 33.9 Morganella psychrotolerans - IS3 family transposase
PMI_RS15560 PMI_RS15560 22.5 Proteus mirabilis HI4320 - IS481 family transposase

Distribution of the homologs in the orthogroup group_308

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_308

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P24577 4.92e-71 222 46 3 240 4 Bmul_4719 Insertion element IS407 uncharacterized 31.7 kDa protein Burkholderia multivorans (strain ATCC 17616 / 249)
P25438 6.19e-54 180 44 2 225 4 None Insertion element IS476 uncharacterized 39.2 kDa protein Xanthomonas euvesicatoria
P37007 5.89e-18 85 26 5 238 2 yagA Uncharacterized protein YagA Escherichia coli (strain K12)
P19769 8.26e-17 80 27 7 252 2 insK Putative transposase InsK for insertion sequence element IS150 Escherichia coli (strain K12)
P0C5W5 4.12e-13 70 27 3 240 3 insD Transposase InsD for insertion element IS2A/D/F/H/I/K Escherichia coli
P0CF59 4.12e-13 70 27 3 240 4 insD7 Transposase InsD for insertion element IS2 on F plasmid Escherichia coli (strain K12)
P0CF58 4.12e-13 70 27 3 240 4 insD6 Transposase InsD for insertion element IS2K Escherichia coli (strain K12)
P0CF57 4.12e-13 70 27 3 240 4 insD5 Transposase InsD for insertion element IS2I Escherichia coli (strain K12)
P0CF56 4.12e-13 70 27 3 240 4 insD4 Transposase InsD for insertion element IS2H Escherichia coli (strain K12)
P0CF55 4.12e-13 70 27 3 240 4 insD3 Transposase InsD for insertion element IS2F Escherichia coli (strain K12)
P0CF54 4.12e-13 70 27 3 240 4 insD2 Transposase InsD for insertion element IS2D Escherichia coli (strain K12)
P0CF53 4.12e-13 70 27 3 240 4 insD1 Transposase InsD for insertion element IS2A Escherichia coli (strain K12)
P0CF61 4.28e-13 70 27 3 240 4 JW5899 Transposase InsD for insertion element IS2-9 Escherichia coli (strain K12)
P0CF64 4.28e-13 70 27 3 240 4 JW5933 Transposase InsD for insertion element IS2-12 Escherichia coli (strain K12)
P0CF63 4.28e-13 70 27 3 240 4 JW5918 Transposase InsD for insertion element IS2-11 Escherichia coli (strain K12)
P0CF62 4.28e-13 70 27 3 240 4 JW5903 Transposase InsD for insertion element IS2-10 Escherichia coli (strain K12)
P51026 1.54e-12 70 28 4 245 3 None Insertion element IS2A uncharacterized 48.2 kDa protein Escherichia coli
P35878 1.78e-12 68 25 7 235 3 nisX1 Transposase for insertion sequence element IS904 Lactococcus lactis subsp. lactis (strain IL1403)
P0A3L4 1.15e-11 65 26 3 160 4 None Insertion element IS136 uncharacterized protein Agrobacterium tumefaciens (strain T37)
P0A3L3 1.15e-11 65 26 3 160 4 Atu4601 Insertion element IS136 uncharacterized protein Atu4601 Agrobacterium fabrum (strain C58 / ATCC 33970)
Q79CE8 2.2e-10 63 26 9 260 3 None Probable transposase for insertion sequence element IS1353 Shigella flexneri
Q9RI18 2.28e-09 57 33 2 115 4 lcrT Low calcium response locus protein T Yersinia pestis
Q00932 2.35e-09 57 33 2 115 4 lcrT Low calcium response locus protein T Yersinia pseudotuberculosis serotype I (strain IP32953)
P16942 4.09e-09 59 23 3 238 4 None Transposase for insertion sequence element IS629 Shigella sonnei
P16940 1.16e-08 57 26 8 231 4 None Insertion element IS600 uncharacterized 31 kDa protein Shigella sonnei
P0CF60 1.36e-08 57 26 2 201 5 insD8 Putative transposase InsD for insertion element IS2E Escherichia coli (strain K12)
O05086 7.89e-08 54 22 2 206 3 HI_1721 Uncharacterized transposase-like protein HI_1721 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P9WKH8 1.56e-07 54 24 7 231 3 MT1803 Putative transposase for insertion sequence element IS986/IS6110 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P9WKH9 1.63e-07 54 24 7 231 4 Rv0796 Putative transposase for insertion sequence element IS986/IS6110 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
A5TY79 1.63e-07 54 24 7 231 3 MRA_0011 Putative transposase for insertion sequence element IS986/IS6110 Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
P59800 1.63e-07 54 24 7 231 3 BQ2027_MB2838C Putative transposase for insertion sequence element IS986/IS6110 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P0CF85 3.97e-06 50 24 6 230 3 insF Transposase InsF for insertion sequence IS3 Escherichia coli O111:H-
P0CF84 3.97e-06 50 24 6 230 3 insF6 Transposase InsF for insertion sequence IS3fA Escherichia coli (strain K12)
P0CF83 3.97e-06 50 24 6 230 3 insF5 Transposase InsF for insertion sequence IS3E Escherichia coli (strain K12)
P0CF82 3.97e-06 50 24 6 230 3 insF4 Transposase InsF for insertion sequence IS3D Escherichia coli (strain K12)
P0CF81 3.97e-06 50 24 6 230 3 insF3 Transposase InsF for insertion sequence IS3C Escherichia coli (strain K12)
P0CF80 3.97e-06 50 24 6 230 3 insF2 Transposase InsF for insertion sequence IS3B Escherichia coli (strain K12)
P0CF79 3.97e-06 50 24 6 230 3 insF1 Transposase InsF for insertion sequence IS3A Escherichia coli (strain K12)
Q06715 1.27e-05 48 31 2 90 4 None ATP-dependent protease Lactococcus lactis subsp. lactis
Q9JMT3 7.56e-05 46 25 8 233 3 insF7 Transposase InsF for insertion sequence IS3fB Escherichia coli (strain K12)
P17983 0.000103 43 45 0 44 4 None Insertion element ISR1 uncharacterized 11 kDa protein A1 Rhizobium sp.

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_16590
Feature type CDS
Gene -
Product IS3 family transposase
Location 329 - 1084 (strand: -1)
Length 756 (nucleotides) / 251 (amino acids)

Contig

Accession contig_25
Length 47933 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_308
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF13276 HTH-like domain
PF13683 Integrase core domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2801 Mobilome: prophages, transposons (X) X Transposase InsO and inactivated derivatives

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07497 putative transposase - -

Protein Sequence

MMQSRTVYHYRSRRDDRAVTQRIREIAETRVRYGVQRIHILLRREGWLINHKKTHRIYCQEGLNLRTKRPRRHVTARHRQERPAVTAADQCWSMDFVADNLFNGRRIRALTVVDNFSRECLAIEVGQGLRGDDVVAVMARLKQLQHRVPERFQTDNGSEFISKALDKWAYENGVTMDFSRPGKPTDNALIESFNGSFRDECLNVHWFLSLEDAQEKIECWRQEYNRQRPHSSLNNQTPEEFIRSLQKGPDL

Flanking regions ( +/- flanking 50bp)

CCTGGCTGCTGGAGGCCTACCGTATCGGGCTGCGGCGTGGTTGCCGTCTGATGATGCAGAGCCGCACGGTCTACCACTATCGAAGCCGGCGTGACGACCGTGCAGTCACGCAGCGGATAAGGGAAATAGCGGAAACCCGCGTCCGTTACGGTGTGCAGCGTATACACATCCTGCTGCGCCGGGAAGGCTGGCTGATTAACCATAAGAAAACCCACCGTATTTATTGTCAGGAAGGGCTGAATCTGCGGACAAAGCGGCCCCGCCGACATGTCACAGCCAGGCACAGACAGGAGCGTCCGGCAGTGACGGCAGCCGATCAGTGCTGGAGTATGGATTTCGTTGCTGATAATCTGTTCAACGGGCGCCGGATCCGGGCGCTGACTGTAGTCGATAATTTTAGTCGGGAATGTCTGGCGATAGAAGTTGGACAGGGTCTGCGGGGTGACGATGTGGTTGCGGTAATGGCGCGTCTGAAGCAGTTACAGCATCGCGTTCCCGAACGGTTTCAGACCGACAACGGCAGCGAATTTATCTCAAAGGCGCTGGATAAATGGGCATATGAAAACGGGGTAACGATGGACTTCTCCCGGCCCGGAAAGCCGACGGACAATGCGTTAATCGAATCCTTTAATGGTAGCTTCCGTGACGAGTGTCTGAACGTTCACTGGTTCTTGTCGCTGGAAGATGCGCAGGAAAAGATCGAGTGCTGGCGGCAGGAATATAACCGGCAAAGACCCCATTCCTCGTTAAATAACCAGACTCCGGAGGAATTCATCCGAAGTCTGCAAAAAGGTCCGGATCTCTGATTTAACCTGGCGCTGATTTTGGGAGGAGATCAAAAGGTCCGGATCTCTGA