Homologs in group_308

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08900 FBDBKF_08900 45.4 Morganella morganii S1 - Integrase catalytic domain-containing protein
FBDBKF_16590 FBDBKF_16590 33.9 Morganella morganii S1 - IS3 family transposase
EHELCC_12625 EHELCC_12625 45.4 Morganella morganii S2 - Integrase catalytic domain-containing protein
NLDBIP_12965 NLDBIP_12965 45.4 Morganella morganii S4 - Integrase catalytic domain-containing protein
LHKJJB_13590 LHKJJB_13590 45.4 Morganella morganii S3 - Integrase catalytic domain-containing protein
HKOGLL_11440 HKOGLL_11440 45.4 Morganella morganii S5 - Integrase catalytic domain-containing protein
PMI_RS15560 PMI_RS15560 21.2 Proteus mirabilis HI4320 - IS481 family transposase

Distribution of the homologs in the orthogroup group_308

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_308

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P24577 2.61e-48 167 36 2 251 4 Bmul_4719 Insertion element IS407 uncharacterized 31.7 kDa protein Burkholderia multivorans (strain ATCC 17616 / 249)
P25438 1.42e-40 149 33 2 267 4 None Insertion element IS476 uncharacterized 39.2 kDa protein Xanthomonas euvesicatoria
P17985 7.57e-25 99 51 0 87 3 None Insertion element ISR1 uncharacterized 10 kDa protein A3 Rhizobium sp.
P24580 3.44e-24 97 55 0 85 3 Bmul_4720 Insertion element IS407 uncharacterized 10.0 kDa protein Burkholderia multivorans (strain ATCC 17616 / 249)
P69962 8.35e-24 97 48 0 88 3 lcrS Low calcium response locus protein S Yersinia pseudotuberculosis serotype I (strain IP32953)
P69961 8.35e-24 97 48 0 88 3 lcrS Low calcium response locus protein S Yersinia pestis
Q9RI18 1.33e-17 81 40 2 124 4 lcrT Low calcium response locus protein T Yersinia pestis
Q00932 2.44e-17 81 40 2 124 4 lcrT Low calcium response locus protein T Yersinia pseudotuberculosis serotype I (strain IP32953)
P37007 3.39e-10 64 25 8 280 2 yagA Uncharacterized protein YagA Escherichia coli (strain K12)
P19769 1.09e-06 53 24 4 213 2 insK Putative transposase InsK for insertion sequence element IS150 Escherichia coli (strain K12)
P18416 8.26e-05 48 29 3 102 4 None Transposase for transposon Tn552 Staphylococcus aureus
P11368 0.000178 47 29 4 127 3 pol Intracisternal A-particle Pol-related polyprotein (Fragment) Mouse intracisternal a-particle MIA14
P0A3L4 0.000208 45 22 3 159 4 None Insertion element IS136 uncharacterized protein Agrobacterium tumefaciens (strain T37)
P0A3L3 0.000208 45 22 3 159 4 Atu4601 Insertion element IS136 uncharacterized protein Atu4601 Agrobacterium fabrum (strain C58 / ATCC 33970)
P0CT43 0.000271 47 24 2 138 3 Tf2-8 Transposon Tf2-8 polyprotein Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P0CT42 0.000271 47 24 2 138 3 Tf2-7 Transposon Tf2-7 polyprotein Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P0CT39 0.000275 47 24 2 138 3 Tf2-6 Transposon Tf2-6 polyprotein Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P0CT38 0.000275 47 24 2 138 3 Tf2-5 Transposon Tf2-5 polyprotein Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P0CT36 0.000275 47 24 2 138 1 Tf2-3 Transposon Tf2-3 polyprotein Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P0CT41 0.000275 47 24 2 138 3 Tf2-12 Transposon Tf2-12 polyprotein Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P0CT40 0.00029 46 24 2 138 3 Tf2-9 Transposon Tf2-9 polyprotein Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P0CT37 0.00029 46 24 2 138 3 Tf2-4 Transposon Tf2-4 polyprotein Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P0CT35 0.00029 46 24 2 138 3 Tf2-2 Transposon Tf2-2 polyprotein Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P0CT34 0.00029 46 24 2 138 3 Tf2-1 Transposon Tf2-1 polyprotein Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q9UR07 0.000306 46 24 2 138 3 Tf2-11 Transposon Tf2-11 polyprotein Schizosaccharomyces pombe (strain 972 / ATCC 24843)
O05086 0.000508 44 22 7 210 3 HI_1721 Uncharacterized transposase-like protein HI_1721 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P12894 0.000519 45 30 3 109 3 None Intracisternal A-particle Pol-related polyprotein (Fragment) Mouse intracisternal a-particle IL3

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01605
Feature type CDS
Gene -
Product IS3 family transposase
Location 355224 - 356068 (strand: -1)
356068 - 356320 (strand: -1)
Length 1098 (nucleotides) / 365 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_308
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF01527 Transposase
PF13683 Integrase core domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2801 Mobilome: prophages, transposons (X) X Transposase InsO and inactivated derivatives

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07497 putative transposase - -

Protein Sequence

MKKSRFTDSQIIAILKQAEAGTPVPELCREHSMSSASFYKWRSRFGGMDASMVARLKELEDENRRLKKMYPEEQLKSEIIQEAMPKKVVTTPQRRLLAQNAVASSGISIRLACEIFCISNSGYRYQSKLSDENQLIADLLTEQTTKNNQSEFGLCFLFLRNVKGFRWNHKRVYRIYCELKLNLRIKPKARIILLPPAPRTVPEMINQTWSMDFMHDQLSDDRTFRTFNVIDDFNREALAIDVDFSLPAARVIRSLEQIIEWRGKPDCIRCDNGPKYLSHQLQEWAINRKITLLYIQPGKPQQNAYIERFNRTMRYDWLNQTIFSHIREVQEVATNWLWHYNHERPHMGLGGITPMQRRAQLTIFY

Flanking regions ( +/- flanking 50bp)

CAAAAAAAGTGGTAACCACGCCACAGCGTCGTCTGTTGGCTCAGAATGCCGTGGCGAGCAGCGGTATTAGTATCCGTCTAGCCTGTGAAATATTCTGTATCAGCAACAGCGGTTACCGTTATCAGTCAAAACTTAGCGATGAAAATCAGCTCATTGCCGATTTACTGACAGAACAAACGACAAAAAATAACCAGTCGGAATTTGGATTATGTTTTTTATTTCTGCGGAATGTAAAAGGCTTCCGCTGGAATCATAAACGTGTTTACCGTATTTATTGTGAACTGAAACTGAATTTACGGATTAAGCCAAAAGCCCGGATTATCCTATTACCACCGGCTCCGCGGACAGTGCCGGAAATGATTAATCAGACCTGGTCAATGGATTTTATGCATGACCAGTTGAGTGATGACAGAACATTCCGGACATTCAATGTGATTGATGATTTTAACCGTGAAGCACTGGCCATTGATGTGGATTTTTCATTACCGGCCGCGCGGGTTATCCGTTCGCTGGAACAGATTATTGAATGGCGTGGAAAACCGGATTGTATTCGTTGTGATAACGGCCCGAAATATCTGAGCCATCAGTTGCAGGAATGGGCAATAAACAGAAAGATAACACTGTTGTATATTCAGCCCGGAAAACCACAGCAGAATGCATATATTGAACGCTTTAACAGGACAATGCGCTATGACTGGCTGAACCAGACTATTTTTAGCCACATTAGGGAAGTACAGGAAGTCGCAACAAATTGGTTATGGCATTATAATCATGAGCGACCTCACATGGGTCTGGGCGGTATTACGCCGATGCAAAGACGAGCTCAGTTAACCATATTCTACTGAAAACCTCTGTTTAAAATGGGGGAATTACCAGGTGATAAATGTCCGAAGTGAGAGTGTTCATAAGTGGAATTTTCTCGTAACATGAATCGGGGAGATTTATATGAAAAAATCACGTTTTACCGACAGTCAGATCATCGCTATTCTGAAACAGGCTGAAGCCGGAACACCGGTTCCCGAGCTTTGTCGTGAGCACAGTATGAGCAGCGCGAGCTTTTATAAATGGCGTTCACGTTTCGGCGGAATGGATGCTTCCATGGTCGCCCGTCTCAAAGAACTTGAGGATGAAAACCGGCGACTGAAAAAAATGTATCCCGAAGAACAACTTAAATCCGAAATCATTCAGGAAGCCATGC