Homologs in group_1736

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_14190 EHELCC_14190 100.0 Morganella morganii S2 hemN oxygen-independent coproporphyrinogen III oxidase
NLDBIP_15285 NLDBIP_15285 100.0 Morganella morganii S4 hemN oxygen-independent coproporphyrinogen III oxidase
LHKJJB_15325 LHKJJB_15325 100.0 Morganella morganii S3 hemN oxygen-independent coproporphyrinogen III oxidase
HKOGLL_14445 HKOGLL_14445 100.0 Morganella morganii S5 hemN oxygen-independent coproporphyrinogen III oxidase
F4V73_RS14525 F4V73_RS14525 92.1 Morganella psychrotolerans hemN oxygen-independent coproporphyrinogen III oxidase
PMI_RS14260 PMI_RS14260 78.9 Proteus mirabilis HI4320 hemN oxygen-independent coproporphyrinogen III oxidase

Distribution of the homologs in the orthogroup group_1736

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1736

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P32131 0.0 725 75 0 452 1 hemN Oxygen-independent coproporphyrinogen III oxidase Escherichia coli (strain K12)
P0A1E1 0.0 722 75 0 452 3 hemN Oxygen-independent coproporphyrinogen III oxidase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1E2 0.0 722 75 0 452 3 None Oxygen-independent coproporphyrinogen III oxidase Salmonella typhi
P74132 3.38e-161 466 51 3 453 1 hemN Oxygen-independent coproporphyrinogen III oxidase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P77915 1.29e-155 452 49 4 461 2 hemN Oxygen-independent coproporphyrinogen III oxidase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O34162 1.89e-140 414 47 2 439 2 hemN Oxygen-independent coproporphyrinogen III oxidase Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
O67886 1.24e-136 403 44 3 453 3 hemN Oxygen-independent coproporphyrinogen III oxidase Aquifex aeolicus (strain VF5)
O25376 4.09e-125 374 42 4 455 3 hemN Oxygen-independent coproporphyrinogen III oxidase Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZLH0 4.07e-123 369 42 6 456 3 hemN Oxygen-independent coproporphyrinogen III oxidase Helicobacter pylori (strain J99 / ATCC 700824)
O31067 7.41e-106 320 52 3 326 3 hemN Oxygen-independent coproporphyrinogen III oxidase (Fragment) Thermostichus vulcanus
O31381 7.7e-95 296 37 3 426 3 hemN Oxygen-independent coproporphyrinogen III oxidase Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
P95651 1.26e-89 283 37 4 437 3 hemN Oxygen-independent coproporphyrinogen III oxidase Cereibacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)
Q51676 1.34e-87 277 36 5 428 3 hemN Oxygen-independent coproporphyrinogen III oxidase Paracoccus denitrificans (strain Pd 1222)
P33770 3.19e-87 276 37 5 440 3 hemN Coproporphyrinogen III oxidase, anaerobic 1 Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.)
P51008 6.36e-81 260 35 4 443 3 hemZ Oxygen-independent coproporphyrinogen III oxidase Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.)
P95506 2.53e-71 225 70 0 143 3 hemN Oxygen-independent coproporphyrinogen III oxidase (Fragment) Mannheimia haemolytica
P54304 5.36e-37 142 25 6 389 2 hemW Heme chaperone HemW Bacillus subtilis (strain 168)
P52062 1.23e-30 125 32 4 244 1 hemW Heme chaperone HemW Escherichia coli (strain K12)
P55477 8.99e-30 119 35 2 192 4 NGR_a03400 Uncharacterized protein y4hJ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q9CGF7 5.43e-29 120 30 5 250 1 hemW Heme chaperone HemW Lactococcus lactis subsp. lactis (strain IL1403)
A0A384LP51 7.89e-29 121 24 5 385 1 chuW Anaerobilin synthase Escherichia coli O157:H7
P43899 1.6e-28 119 29 2 245 3 hemW Heme chaperone HemW Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8K928 1.34e-27 116 26 5 277 3 hemW Heme chaperone HemW Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57615 1.14e-25 111 23 11 394 3 hemW Heme chaperone HemW Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P73245 1.97e-25 110 25 7 338 1 hemW Heme chaperone HemW Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P9WP73 2.94e-25 110 25 8 388 1 hemW Heme chaperone HemW Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP72 2.94e-25 110 25 8 388 3 hemW Heme chaperone HemW Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A4IGH2 5.89e-18 89 25 4 252 2 rsad1 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial Danio rerio
Q9HA92 7.77e-16 82 26 6 258 1 RSAD1 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial Homo sapiens
Q5SUV1 1.98e-15 81 25 5 244 2 Rsad1 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial Mus musculus
A5D7B1 2.05e-14 78 25 5 244 2 RSAD1 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial Bos taurus
Q89A47 4.33e-12 70 22 0 188 3 hemW Putative heme chaperone HemW-like protein Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q54VE8 1.2e-10 67 25 5 186 3 rsad1 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial Dictyostelium discoideum
Q796V8 1.88e-09 63 24 5 195 2 hemZ Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ Bacillus subtilis (strain 168)
A0M7D3 7.65e-06 52 24 10 237 3 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase Christiangramia forsetii (strain DSM 17595 / CGMCC 1.15422 / KT0803)
A1VF04 1.1e-05 51 24 12 293 3 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase Nitratidesulfovibrio vulgaris (strain DP4)
Q72DE5 1.25e-05 51 24 12 293 3 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)
B3EDL2 3.94e-05 49 25 7 223 3 rimO Ribosomal protein uS12 methylthiotransferase RimO Chlorobium limicola (strain DSM 245 / NBRC 103803 / 6330)
B4S8Z6 5.94e-05 48 26 8 224 3 rimO Ribosomal protein uS12 methylthiotransferase RimO Prosthecochloris aestuarii (strain DSM 271 / SK 413)
Q2RZF8 0.000251 47 25 11 243 3 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase Salinibacter ruber (strain DSM 13855 / M31)
B3EPX5 0.000299 46 25 6 210 3 rimO Ribosomal protein uS12 methylthiotransferase RimO Chlorobium phaeobacteroides (strain BS1)
B5ENG4 0.000308 46 25 13 254 3 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase Acidithiobacillus ferrooxidans (strain ATCC 53993 / BNL-5-31)
B7J5B2 0.000308 46 25 13 254 3 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP 104768 / NCIMB 8455)
A8MLX7 0.001 45 26 5 163 3 rimO Ribosomal protein uS12 methylthiotransferase RimO Alkaliphilus oremlandii (strain OhILAs)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_12115
Feature type CDS
Gene hemN
Product oxygen-independent coproporphyrinogen III oxidase
Location 78508 - 79878 (strand: -1)
Length 1371 (nucleotides) / 456 (amino acids)

Contig

Accession contig_14
Length 134564 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1736
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF04055 Radical SAM superfamily
PF06969 HemN C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0635 Coenzyme transport and metabolism (H) H Coproporphyrinogen-III oxidase HemN (oxygen-independent) or related Fe-S oxidoreductase

Kegg Ortholog Annotation(s)

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG013205 oxygen-independent coproporphyrinogen III oxidase VF0758 Nutritional/Metabolic factor

Protein Sequence

MSDAIIWDLALIRKYNYSGPRYTSYPTALEFNQQYSDSDFIASANRYPERPLSLYVHIPFCHKLCYFCGCNKLVTRQKHKADEYLAVLEKEIAARAPLFAGREVHQMHWGGGTPTYLDKAQISRLTGMLRQHFRFAPDAELSIEIDPREIELDVIDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEATIFALVERARATGFESVSIDLIYGLPKQTPESFAFTLKRVAELSPDRLSVFNYAHLPDLFAAQRKIKDEDLPSAEQKLTILQQTIENLTGSGYQFIGMDHFAKPDDELAVAQNNGILHRNFQGYTTHEECDLLGFGVSAISMLGDHYAQNQKDLKTWYAQVEERGNGLCRGLVLTEEDCLRRDVIKALICNFRLDYPQIEKQYNLDFKTHFAEDLQLLQPMADDGLVEIRDDALVVTPRGRLLIRNICMCFDTYLRNQMRQRQFSRVI

Flanking regions ( +/- flanking 50bp)

CAGAGAACGGAAATACATTAATTCTGCAATGGTGAGGCAAAGGGGAGAGCATGTCTGACGCGATCATCTGGGATCTGGCATTGATCCGGAAATATAACTATTCCGGTCCGCGATACACTTCGTATCCGACCGCACTGGAATTTAATCAGCAGTACAGTGACAGTGATTTTATCGCCTCAGCAAACCGTTATCCGGAGCGCCCGCTGTCGTTATATGTGCATATCCCGTTCTGCCATAAATTATGTTACTTCTGCGGCTGTAATAAATTAGTCACCCGTCAGAAGCATAAGGCGGATGAATACCTGGCCGTGCTGGAGAAAGAAATCGCCGCCCGTGCCCCGTTGTTTGCCGGACGCGAAGTGCATCAGATGCACTGGGGCGGCGGTACGCCGACCTATCTCGATAAAGCACAGATCAGCCGTCTGACCGGTATGCTGCGTCAGCATTTCCGCTTTGCGCCGGATGCCGAGCTTTCCATTGAAATCGACCCGCGTGAAATAGAATTGGACGTTATCGACCATCTGCGGGCGGAAGGATTTAACCGCCTGAGCATGGGGGTGCAGGATTTCAACAAAGAAGTGCAGCGCCTGGTCAACCGCGAGCAGGATGAAGCGACGATTTTTGCGCTGGTGGAGCGTGCCCGTGCAACCGGGTTTGAATCCGTCAGTATCGACCTGATATACGGGCTGCCGAAACAGACGCCGGAAAGTTTTGCTTTTACCCTGAAACGGGTGGCGGAACTGTCACCGGATCGCCTGAGTGTCTTTAACTATGCCCATCTGCCGGACCTGTTTGCCGCCCAGCGGAAAATCAAAGATGAAGACCTGCCTTCCGCAGAGCAGAAACTGACAATTTTACAGCAGACGATTGAAAACCTGACCGGCAGCGGTTATCAGTTTATCGGGATGGATCACTTCGCCAAACCGGATGATGAGCTGGCGGTCGCACAGAATAACGGCATCCTGCACCGTAATTTCCAGGGGTACACCACTCATGAGGAGTGCGATTTGCTGGGCTTTGGTGTCTCTGCGATCAGCATGCTGGGTGATCACTATGCCCAGAACCAGAAAGACCTGAAAACCTGGTATGCGCAGGTGGAAGAGCGCGGCAACGGGTTGTGCCGCGGTCTGGTGCTGACTGAGGAAGATTGCCTGCGCCGCGATGTGATTAAGGCGCTGATCTGCAACTTCCGGCTGGATTATCCGCAGATTGAAAAGCAGTATAACCTGGATTTTAAAACCCATTTCGCCGAAGATTTGCAATTATTGCAGCCGATGGCGGATGACGGGCTGGTTGAGATCCGCGACGATGCTCTGGTGGTCACACCGCGCGGACGGCTGCTTATCCGTAATATCTGTATGTGTTTCGATACTTATCTGCGCAACCAGATGCGTCAGCGTCAGTTCTCCCGCGTGATTTAATCTGTTTCCGGGGTTGATGCAGTGTCATCAATCCCGGCTTCTTTCAGTTT