Homologs in group_2140

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16085 FBDBKF_16085 68.4 Morganella morganii S1 tonB Periplasmic protein TonB, links inner and outer membranes
EHELCC_16120 EHELCC_16120 68.4 Morganella morganii S2 tonB Periplasmic protein TonB, links inner and outer membranes
NLDBIP_17220 NLDBIP_17220 68.4 Morganella morganii S4 tonB Periplasmic protein TonB, links inner and outer membranes
LHKJJB_17140 LHKJJB_17140 68.4 Morganella morganii S3 tonB Periplasmic protein TonB, links inner and outer membranes
HKOGLL_16700 HKOGLL_16700 68.4 Morganella morganii S5 tonB Periplasmic protein TonB, links inner and outer membranes
PMI_RS15450 PMI_RS15450 32.6 Proteus mirabilis HI4320 - energy transducer TonB

Distribution of the homologs in the orthogroup group_2140

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2140

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9ZH79 2.66e-11 65 40 0 87 3 tonB Protein TonB Pasteurella multocida (strain Pm70)
P42872 6.01e-08 55 27 2 145 3 tonB Protein TonB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O52042 0.000274 45 31 4 123 3 tonB Protein TonB Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q05613 0.000779 43 32 0 68 3 tonB Protein TonB Pseudomonas putida

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS17530
Feature type CDS
Gene -
Product energy transducer TonB
Location 141708 - 142511 (strand: 1)
Length 804 (nucleotides) / 267 (amino acids)

Contig

Accession term accessions NZ_VXKB01000007 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 196482 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2140
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03544 Gram-negative bacterial TonB protein C-terminal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0810 Cell wall/membrane/envelope biogenesis (M) M Periplasmic protein TonB, links inner and outer membranes

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03832 periplasmic protein TonB - -

Protein Sequence

MNTCTIVALPHPPFLRVLAKYGTQQQTFFSAGLCVLLCFTGLLLTGSPPLPSTRLHQIDNRGETPAITMAVHMNAAPAYQELQPEAEKLPPPKDSPSQAELATARRDMRTQETSKSPPKPIQKTIRKKQEKPSPVTADTTMDTGEDKTTRQQSGGQAISPTHSATQGRDNQKVQDDYFNLLRQKIEEQKHYPRRARSAGQRGISEISFSLDNNGKPFSPTVTRSSGYELLDNAAMEAVMNVTAIGAPPPDAKREVTFSLRFQLNKGF

Flanking regions ( +/- flanking 50bp)

GGCACCGGGCAGAGCGGTGAAGCTCAGTATGTCTGCGAGATTCTGATGAAATGAATACCTGTACAATAGTGGCATTACCGCATCCGCCTTTTTTGCGCGTGCTGGCAAAATACGGAACACAACAGCAGACATTTTTCTCTGCCGGGTTATGTGTATTGTTATGCTTCACCGGGCTGCTCCTTACGGGCAGCCCCCCGTTACCCTCAACCCGGTTACATCAGATTGATAACAGAGGGGAAACACCTGCAATAACCATGGCAGTGCATATGAATGCAGCACCAGCTTATCAGGAGCTACAACCAGAGGCGGAAAAATTACCTCCGCCAAAGGATTCTCCATCTCAGGCTGAGCTGGCCACCGCCCGCAGGGACATGCGAACACAGGAGACATCAAAATCCCCGCCAAAACCCATACAAAAAACGATCAGGAAAAAACAGGAAAAACCTTCGCCCGTAACAGCTGATACCACTATGGACACCGGTGAGGATAAAACCACCCGGCAACAATCGGGCGGGCAGGCCATCTCTCCAACACACTCAGCCACACAAGGTCGTGATAATCAAAAAGTGCAGGATGATTACTTTAATCTGCTGAGACAAAAAATTGAGGAACAAAAACACTATCCTCGCCGGGCACGAAGTGCCGGACAACGGGGTATCAGTGAGATTTCATTTTCACTCGATAACAACGGTAAACCATTTTCACCCACAGTAACCCGCTCTTCCGGTTACGAATTACTGGATAATGCAGCAATGGAAGCCGTGATGAATGTTACCGCTATCGGAGCGCCGCCGCCGGACGCTAAACGGGAAGTGACGTTTTCATTGCGTTTTCAGTTGAACAAGGGGTTTTAACGGCAGTGATTATTTTTTGTGAATATAAAAATAATAGGTATGCTTGCACA