Homologs in group_2140

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16085 FBDBKF_16085 100.0 Morganella morganii S1 tonB Periplasmic protein TonB, links inner and outer membranes
NLDBIP_17220 NLDBIP_17220 100.0 Morganella morganii S4 tonB Periplasmic protein TonB, links inner and outer membranes
LHKJJB_17140 LHKJJB_17140 100.0 Morganella morganii S3 tonB Periplasmic protein TonB, links inner and outer membranes
HKOGLL_16700 HKOGLL_16700 100.0 Morganella morganii S5 tonB Periplasmic protein TonB, links inner and outer membranes
F4V73_RS17530 F4V73_RS17530 68.4 Morganella psychrotolerans - energy transducer TonB
PMI_RS15450 PMI_RS15450 31.9 Proteus mirabilis HI4320 - energy transducer TonB

Distribution of the homologs in the orthogroup group_2140

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2140

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P42872 1.62e-09 60 36 0 87 3 tonB Protein TonB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9ZH79 1.78e-09 60 37 0 87 3 tonB Protein TonB Pasteurella multocida (strain Pm70)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_16120
Feature type CDS
Gene tonB
Product Periplasmic protein TonB, links inner and outer membranes
Location 3940 - 4737 (strand: -1)
Length 798 (nucleotides) / 265 (amino acids)

Contig

Accession ZDB_228
Length 65335 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2140
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF03544 Gram-negative bacterial TonB protein C-terminal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0810 Cell wall/membrane/envelope biogenesis (M) M Periplasmic protein TonB, links inner and outer membranes

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03832 periplasmic protein TonB - -

Protein Sequence

MYGAIALPHPPFLFSRERTGTWQQMVSAAAIGVCFSVAGLLITGSPPVTAPQQHQIDNRGQTPAVSVAIQMSAAPAYQETEPEEEQLPPPQESPSQAELATARRKTPEKTTKPPSAKPAVNAVNKKTEKSEPITTKTTADTGEDKTTQQQSGGQAVSPTNSATAGADNRKAQEDYFNLLRQKIEEQKHYPRRARSAGQRGISTISFSLDDNGKPFAPVVTRSSGYELLDNAAMDAVIRVAAVGTPPPGAKRRVTFSLRFQLNKGF

Flanking regions ( +/- flanking 50bp)

CTGCACCGGGCCGGGCCGTAAAATTCAATGTTTCCGCGAGGTTCTGATTTATGTACGGCGCAATAGCATTACCGCATCCGCCTTTCCTGTTTTCCCGGGAAAGAACCGGAACGTGGCAGCAGATGGTTTCTGCTGCTGCGATCGGTGTGTGTTTCTCCGTCGCCGGGCTGCTCATCACGGGCAGTCCCCCGGTGACCGCCCCGCAACAGCATCAGATTGATAACCGGGGACAAACCCCGGCGGTTTCCGTTGCCATTCAGATGAGTGCAGCACCGGCATATCAGGAGACAGAGCCGGAGGAGGAACAATTACCACCACCACAGGAATCACCGTCTCAGGCAGAACTGGCAACAGCCCGCCGGAAAACACCGGAGAAAACAACCAAACCGCCATCAGCAAAACCGGCAGTAAACGCTGTGAACAAAAAAACGGAGAAATCAGAACCGATCACCACAAAAACCACCGCGGATACCGGAGAGGATAAAACCACACAGCAGCAGTCCGGCGGACAGGCAGTATCCCCGACAAATTCTGCCACCGCAGGAGCCGATAACCGGAAAGCACAGGAGGATTACTTTAACCTGCTGCGGCAAAAAATTGAGGAGCAAAAACATTACCCCCGCCGGGCCCGCAGCGCCGGGCAGCGGGGGATCAGCACCATTTCCTTTTCTCTCGACGATAACGGCAAACCTTTTGCACCGGTCGTTACCCGCTCTTCCGGTTATGAATTACTGGATAACGCCGCAATGGATGCTGTCATCAGGGTTGCTGCTGTCGGTACGCCGCCACCAGGTGCAAAACGGAGGGTGACATTCTCATTACGTTTTCAGCTGAACAAGGGTTTTTAACGGCTGAGTGTATTCACGACAGTGATTATTTCTTGTGCACACAGAGCTAA