Homologs in group_2140

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16085 FBDBKF_16085 31.9 Morganella morganii S1 tonB Periplasmic protein TonB, links inner and outer membranes
EHELCC_16120 EHELCC_16120 31.9 Morganella morganii S2 tonB Periplasmic protein TonB, links inner and outer membranes
NLDBIP_17220 NLDBIP_17220 31.9 Morganella morganii S4 tonB Periplasmic protein TonB, links inner and outer membranes
LHKJJB_17140 LHKJJB_17140 31.9 Morganella morganii S3 tonB Periplasmic protein TonB, links inner and outer membranes
HKOGLL_16700 HKOGLL_16700 31.9 Morganella morganii S5 tonB Periplasmic protein TonB, links inner and outer membranes
F4V73_RS17530 F4V73_RS17530 32.6 Morganella psychrotolerans - energy transducer TonB

Distribution of the homologs in the orthogroup group_2140

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2140

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9ZH79 3.28e-21 92 44 1 99 3 tonB Protein TonB Pasteurella multocida (strain Pm70)
P42872 3.67e-14 73 35 2 121 3 tonB Protein TonB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q05613 3.14e-06 50 39 1 66 3 tonB Protein TonB Pseudomonas putida
Q9ZJP4 3.58e-05 47 26 3 136 3 tonB Protein TonB Helicobacter pylori (strain J99 / ATCC 700824)
O25899 8.17e-05 46 26 3 136 1 tonB Protein TonB Helicobacter pylori (strain ATCC 700392 / 26695)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS15450
Feature type CDS
Gene -
Product energy transducer TonB
Location 3434657 - 3435460 (strand: 1)
Length 804 (nucleotides) / 267 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2140
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03544 Gram-negative bacterial TonB protein C-terminal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0810 Cell wall/membrane/envelope biogenesis (M) M Periplasmic protein TonB, links inner and outer membranes

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03832 periplasmic protein TonB - -

Protein Sequence

MLALSVRQPLNIYYWLIAISLVYISLLSWVLNSWSMTESAHHIDQQQQNTLSVYQVMFSPPKQSTTMIEPRIKIESQQPPIALPRSENGEFIEAPKQPAKKRQQQPTPITPKVIKQVKKQPVVDKTVPIKPRDLTNHNIVQSTSQPSAENLTQHTASSLAGSSRALSENGIGQGESENHYISLLRREIERHKRYPAQARRMQDEGLVVVRFSLTNEGYISSVALEQTSGVASLDNAALAAVKRVKPIGPKPNNLSDPLTISLKFQLN

Flanking regions ( +/- flanking 50bp)

TAGGTGTAACAGCCCAATTTTAATACAAGGATAAAATAGGAGTTTTATTTATGTTGGCACTTTCTGTCAGACAGCCACTTAATATTTATTATTGGCTCATTGCGATATCATTAGTTTATATCAGTTTATTGAGTTGGGTGCTTAATTCATGGTCTATGACAGAAAGTGCGCACCATATTGATCAGCAACAGCAAAATACATTATCGGTCTATCAGGTGATGTTTTCGCCACCTAAACAATCTACTACCATGATTGAACCGAGAATAAAGATCGAGTCACAACAACCACCTATTGCACTACCAAGAAGTGAGAACGGTGAATTTATTGAAGCGCCCAAACAACCCGCAAAAAAGCGTCAACAACAACCGACCCCAATAACACCTAAAGTGATAAAACAGGTAAAAAAACAGCCAGTAGTAGACAAAACAGTACCTATAAAACCACGTGATTTAACAAATCACAACATAGTTCAAAGTACATCACAACCATCAGCAGAAAACTTAACACAGCATACCGCGAGTTCATTGGCTGGGAGCAGTCGTGCATTAAGTGAAAATGGTATTGGACAGGGAGAGTCTGAAAATCACTATATCAGTTTATTGCGCCGAGAAATTGAGCGTCATAAGCGTTATCCTGCGCAAGCTCGTCGTATGCAAGATGAAGGGCTGGTTGTTGTGCGTTTTTCATTAACCAATGAAGGCTATATTTCATCCGTTGCACTTGAACAGACCTCAGGGGTGGCATCTCTTGATAATGCTGCACTTGCCGCGGTAAAACGGGTAAAACCAATTGGCCCGAAACCTAATAACTTATCTGATCCTTTAACTATCTCGTTAAAATTTCAATTAAATTGAATAAAAAATACCTAAGTCAATATTACACTTAGGTATTTTATGGAAATAAA