Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K03832
Protein list: lists the 28 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.
Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism | |
---|---|---|---|---|---|---|---|---|
0 | group_76 | FBDBKF_01210 | 225158 | 225871 | -1 | tonB | Periplasmic protein TonB, links inner and outer membranes | Morganella morganii S1 |
1 | group_76 | EHELCC_00335 | 82997 | 83710 | 1 | tonB | Periplasmic protein TonB, links inner and outer membranes | Morganella morganii S2 |
2 | group_76 | NLDBIP_03125 | 596426 | 597139 | -1 | tonB | Periplasmic protein TonB, links inner and outer membranes | Morganella morganii S4 |
3 | group_76 | LHKJJB_04640 | 203667 | 204380 | -1 | tonB | Periplasmic protein TonB, links inner and outer membranes | Morganella morganii S3 |
4 | group_76 | HKOGLL_02405 | 83202 | 83915 | 1 | tonB | Periplasmic protein TonB, links inner and outer membranes | Morganella morganii S5 |
5 | group_369 | FBDBKF_17715 | 219 | 995 | -1 | tonB | Periplasmic protein TonB, links inner and outer membranes | Morganella morganii S1 |
6 | group_369 | EHELCC_09740 | 179651 | 180427 | -1 | tonB | Periplasmic protein TonB, links inner and outer membranes | Morganella morganii S2 |
7 | group_369 | NLDBIP_10120 | 179651 | 180427 | -1 | tonB | Periplasmic protein TonB, links inner and outer membranes | Morganella morganii S4 |
8 | group_369 | LHKJJB_07635 | 36811 | 37587 | 1 | tonB | Periplasmic protein TonB, links inner and outer membranes | Morganella morganii S3 |
9 | group_369 | HKOGLL_07185 | 36811 | 37587 | 1 | tonB | Periplasmic protein TonB, links inner and outer membranes | Morganella morganii S5 |
10 | group_247 | FBDBKF_05245 | 55532 | 56272 | -1 | tonB | Protein TonB | Morganella morganii S1 |
11 | group_247 | EHELCC_12345 | 125222 | 125962 | 1 | tonB | Protein TonB | Morganella morganii S2 |
12 | group_247 | NLDBIP_12685 | 125177 | 125917 | 1 | tonB | Protein TonB | Morganella morganii S4 |
13 | group_247 | LHKJJB_12545 | 125222 | 125962 | 1 | tonB | Protein TonB | Morganella morganii S3 |
14 | group_247 | HKOGLL_11160 | 125222 | 125962 | 1 | tonB | Protein TonB | Morganella morganii S5 |
15 | group_76 | FBDBKF_16085 | 3940 | 4737 | -1 | tonB | Periplasmic protein TonB, links inner and outer membranes | Morganella morganii S1 |
16 | group_76 | EHELCC_16120 | 3940 | 4737 | -1 | tonB | Periplasmic protein TonB, links inner and outer membranes | Morganella morganii S2 |
17 | group_76 | NLDBIP_17220 | 57433 | 58230 | 1 | tonB | Periplasmic protein TonB, links inner and outer membranes | Morganella morganii S4 |
18 | group_76 | LHKJJB_17140 | 60535 | 61332 | 1 | tonB | Periplasmic protein TonB, links inner and outer membranes | Morganella morganii S3 |
19 | group_76 | HKOGLL_16700 | 3940 | 4737 | -1 | tonB | Periplasmic protein TonB, links inner and outer membranes | Morganella morganii S5 |
20 | group_247 | F4V73_RS05700 | 1212089 | 1212811 | -1 | TonB family protein | Morganella psychrotolerans | |
21 | group_369 | F4V73_RS15245 | 34446 | 35168 | 1 | TonB family protein | Morganella psychrotolerans | |
22 | group_76 | F4V73_RS17530 | 141708 | 142511 | 1 | energy transducer TonB | Morganella psychrotolerans | |
23 | group_247 | PMI_RS06540 | 1434713 | 1435438 | -1 | tonB | TonB system transport protein TonB | Proteus mirabilis HI4320 |
24 | group_369 | PMI_RS07545 | 1647458 | 1648312 | -1 | TonB family protein | Proteus mirabilis HI4320 | |
25 | group_247 | PMI_RS11845 | 2617514 | 2617921 | -1 | TonB family protein | Proteus mirabilis HI4320 | |
26 | group_76 | PMI_RS15450 | 3434657 | 3435460 | 1 | energy transducer TonB | Proteus mirabilis HI4320 | |
27 | group_369 | PMI_RS18455 | 4052295 | 4053086 | 1 | energy transducer TonB | Proteus mirabilis HI4320 |