Homologs in group_3176

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01210 FBDBKF_01210 100.0 Morganella morganii S1 tonB Periplasmic protein TonB, links inner and outer membranes
EHELCC_00335 EHELCC_00335 100.0 Morganella morganii S2 tonB Periplasmic protein TonB, links inner and outer membranes
NLDBIP_03125 NLDBIP_03125 100.0 Morganella morganii S4 tonB Periplasmic protein TonB, links inner and outer membranes
LHKJJB_04640 LHKJJB_04640 100.0 Morganella morganii S3 tonB Periplasmic protein TonB, links inner and outer membranes

Distribution of the homologs in the orthogroup group_3176

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3176

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P42872 7.53e-13 69 34 5 140 3 tonB Protein TonB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9ZH79 1.15e-08 57 34 1 97 3 tonB Protein TonB Pasteurella multocida (strain Pm70)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_02405
Feature type CDS
Gene tonB
Product Periplasmic protein TonB, links inner and outer membranes
Location 83202 - 83915 (strand: 1)
Length 714 (nucleotides) / 237 (amino acids)

Contig

Accession ZDB_680
Length 282413 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3176
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF03544 Gram-negative bacterial TonB protein C-terminal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0810 Cell wall/membrane/envelope biogenesis (M) M Periplasmic protein TonB, links inner and outer membranes

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03832 periplasmic protein TonB - -

Protein Sequence

MNRCKLAGLFFSLCLHGGLLIFLFCISQTDYAENGNIRTDNRSAMLLLPAPEKAEEHSPDIPEQSEKSLLPVISPAADKKSEWQAEKNRKKRENKLRQKIKKPVTAPRHDKDVHKPAEVPDTGLQSSLSAGNHNLTTADTVAGQRSDDELWLYREKMRREILRYIYYPARIRKVSAAVDINVSISGTGTLSDPVVIRSSGNRILDKIALSAVSKYQPVGIPPPGLDKSIVLTVDFIK

Flanking regions ( +/- flanking 50bp)

TACGTCATGCCGGAAAATTCCATGCGGTATTACTGCCTGCGGAGTAATCAATGAATCGCTGCAAACTGGCCGGTTTATTCTTTTCTCTGTGTCTTCACGGCGGACTGCTTATTTTTTTATTCTGTATCAGCCAGACTGATTATGCGGAAAACGGCAATATAAGGACGGATAACCGCAGTGCCATGTTATTGCTGCCTGCGCCGGAAAAGGCGGAGGAACACTCTCCGGATATACCGGAACAGAGCGAGAAAAGCCTGTTACCGGTGATAAGCCCGGCAGCGGATAAAAAATCAGAATGGCAGGCGGAAAAAAACAGAAAAAAACGTGAGAATAAACTGCGGCAGAAAATTAAAAAGCCGGTTACTGCACCGCGGCATGATAAAGATGTGCATAAACCGGCAGAGGTTCCGGATACCGGTTTACAGTCATCTCTGTCGGCCGGAAATCATAACCTGACAACAGCCGATACCGTTGCCGGGCAGCGGAGTGACGACGAGCTGTGGTTATACCGGGAAAAAATGCGCAGAGAGATCCTGCGGTATATTTATTATCCTGCCAGAATCAGAAAGGTCAGCGCAGCCGTTGATATTAATGTCAGTATTTCCGGAACCGGTACACTTTCTGACCCCGTGGTGATCAGAAGTTCGGGGAACCGGATACTGGATAAAATTGCGCTCAGTGCGGTCAGTAAATATCAGCCGGTAGGAATTCCGCCGCCGGGGTTGGACAAAAGCATTGTCCTGACGGTGGATTTTATTAAGTAAACTGCGTGTTTGTTTGCATGTCCGGTATAAAAAATCACCTGCGTCATAAA