COG0810
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0810, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 28 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description |
Periplasmic protein TonB, links inner and outer membranes |
Function(s) descr. |
Cell wall/membrane/envelope biogenesis (M) |
Occurence in the database
COG0810 is associated with 28 different proteins (see tab "Protein list" and "Profile") |
The 28 proteins are classified into 4 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_3176 |
FBDBKF_01210 |
225158 |
225871 |
-1 |
tonB |
Periplasmic protein TonB, links inner and outer membranes |
Morganella morganii S1 |
1 |
group_268 |
FBDBKF_05245 |
55532 |
56272 |
-1 |
tonB |
Protein TonB |
Morganella morganii S1 |
2 |
group_2140 |
FBDBKF_16085 |
3940 |
4737 |
-1 |
tonB |
Periplasmic protein TonB, links inner and outer membranes |
Morganella morganii S1 |
3 |
group_410 |
FBDBKF_17715 |
219 |
995 |
-1 |
tonB |
Periplasmic protein TonB, links inner and outer membranes |
Morganella morganii S1 |
4 |
group_3176 |
EHELCC_00335 |
82997 |
83710 |
1 |
tonB |
Periplasmic protein TonB, links inner and outer membranes |
Morganella morganii S2 |
5 |
group_410 |
EHELCC_09740 |
179651 |
180427 |
-1 |
tonB |
Periplasmic protein TonB, links inner and outer membranes |
Morganella morganii S2 |
6 |
group_268 |
EHELCC_12345 |
125222 |
125962 |
1 |
tonB |
Protein TonB |
Morganella morganii S2 |
7 |
group_2140 |
EHELCC_16120 |
3940 |
4737 |
-1 |
tonB |
Periplasmic protein TonB, links inner and outer membranes |
Morganella morganii S2 |
8 |
group_3176 |
NLDBIP_03125 |
596426 |
597139 |
-1 |
tonB |
Periplasmic protein TonB, links inner and outer membranes |
Morganella morganii S4 |
9 |
group_410 |
NLDBIP_10120 |
179651 |
180427 |
-1 |
tonB |
Periplasmic protein TonB, links inner and outer membranes |
Morganella morganii S4 |
10 |
group_268 |
NLDBIP_12685 |
125177 |
125917 |
1 |
tonB |
Protein TonB |
Morganella morganii S4 |
11 |
group_2140 |
NLDBIP_17220 |
57433 |
58230 |
1 |
tonB |
Periplasmic protein TonB, links inner and outer membranes |
Morganella morganii S4 |
12 |
group_3176 |
LHKJJB_04640 |
203667 |
204380 |
-1 |
tonB |
Periplasmic protein TonB, links inner and outer membranes |
Morganella morganii S3 |
13 |
group_410 |
LHKJJB_07635 |
36811 |
37587 |
1 |
tonB |
Periplasmic protein TonB, links inner and outer membranes |
Morganella morganii S3 |
14 |
group_268 |
LHKJJB_12545 |
125222 |
125962 |
1 |
tonB |
Protein TonB |
Morganella morganii S3 |
15 |
group_2140 |
LHKJJB_17140 |
60535 |
61332 |
1 |
tonB |
Periplasmic protein TonB, links inner and outer membranes |
Morganella morganii S3 |
16 |
group_3176 |
HKOGLL_02405 |
83202 |
83915 |
1 |
tonB |
Periplasmic protein TonB, links inner and outer membranes |
Morganella morganii S5 |
17 |
group_410 |
HKOGLL_07185 |
36811 |
37587 |
1 |
tonB |
Periplasmic protein TonB, links inner and outer membranes |
Morganella morganii S5 |
18 |
group_268 |
HKOGLL_11160 |
125222 |
125962 |
1 |
tonB |
Protein TonB |
Morganella morganii S5 |
19 |
group_2140 |
HKOGLL_16700 |
3940 |
4737 |
-1 |
tonB |
Periplasmic protein TonB, links inner and outer membranes |
Morganella morganii S5 |
20 |
group_268 |
F4V73_RS05700 |
1212089 |
1212811 |
-1 |
|
TonB family protein |
Morganella psychrotolerans |
21 |
group_410 |
F4V73_RS15245 |
34446 |
35168 |
1 |
|
TonB family protein |
Morganella psychrotolerans |
22 |
group_2140 |
F4V73_RS17530 |
141708 |
142511 |
1 |
|
energy transducer TonB |
Morganella psychrotolerans |
23 |
group_268 |
PMI_RS06540 |
1434713 |
1435438 |
-1 |
tonB |
TonB system transport protein TonB |
Proteus mirabilis HI4320 |
24 |
group_410 |
PMI_RS07545 |
1647458 |
1648312 |
-1 |
|
TonB family protein |
Proteus mirabilis HI4320 |
25 |
group_268 |
PMI_RS11845 |
2617514 |
2617921 |
-1 |
|
TonB family protein |
Proteus mirabilis HI4320 |
26 |
group_2140 |
PMI_RS15450 |
3434657 |
3435460 |
1 |
|
energy transducer TonB |
Proteus mirabilis HI4320 |
27 |
group_410 |
PMI_RS18455 |
4052295 |
4053086 |
1 |
|
energy transducer TonB |
Proteus mirabilis HI4320 |