Homologs in group_4115

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4115

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4115

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10085
Feature type CDS
Gene -
Product helix-turn-helix transcriptional regulator
Location 125224 - 125562 (strand: 1)
Length 339 (nucleotides) / 112 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4115
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF13560 Helix-turn-helix domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1396 Transcription (K) K Transcriptional regulator, contains XRE-family HTH domain

Protein Sequence

MAKSFTRTYSRYSSDATRLLGLMLRTARIEHKLTVEELAERAGVSRGLVYRAEQGDMGCAIGVVFELAAIVGISLFTPDHLSMTLHTANAEKTLSLLPRAVRHPKKIINDDF

Flanking regions ( +/- flanking 50bp)

GGGCTATACTGATGCTATATGCTCTATTAATGGAACAAAAGGAGAGTGTGATGGCAAAATCATTCACCCGAACCTACTCCCGTTATAGCAGCGATGCCACACGGTTGCTGGGATTGATGCTTCGTACTGCGCGTATTGAGCATAAATTAACAGTTGAAGAGTTGGCGGAACGAGCTGGTGTATCCAGGGGGCTTGTTTATCGTGCTGAACAAGGGGATATGGGATGTGCGATTGGTGTGGTGTTTGAACTGGCTGCCATAGTCGGGATTTCACTTTTTACGCCTGATCATCTGTCTATGACGTTACATACCGCAAACGCAGAAAAAACCTTATCGCTTTTGCCACGTGCAGTGCGCCACCCGAAGAAGATAATAAATGATGATTTCTGATAATAATCCTGACCGTGCGTACGTATGGATCTGGTTACCTGATGCGACCC