Homologs in group_61

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12 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01330 FBDBKF_01330 26.4 Morganella morganii S1 icmH type IVB secretion system protein IcmH/DotU
EHELCC_00215 EHELCC_00215 26.4 Morganella morganii S2 icmH type IVB secretion system protein IcmH/DotU
NLDBIP_03245 NLDBIP_03245 26.4 Morganella morganii S4 icmH type IVB secretion system protein IcmH/DotU
LHKJJB_04760 LHKJJB_04760 26.4 Morganella morganii S3 icmH type IVB secretion system protein IcmH/DotU
HKOGLL_02285 HKOGLL_02285 26.4 Morganella morganii S5 icmH type IVB secretion system protein IcmH/DotU
F4V73_RS00030 F4V73_RS00030 27.0 Morganella psychrotolerans icmH type IVB secretion system protein IcmH/DotU
F4V73_RS02340 F4V73_RS02340 27.8 Morganella psychrotolerans icmH type IVB secretion system protein IcmH/DotU
F4V73_RS06975 F4V73_RS06975 13.8 Morganella psychrotolerans icmH type IVB secretion system protein IcmH/DotU
F4V73_RS09340 F4V73_RS09340 23.5 Morganella psychrotolerans tssL type VI secretion system protein TssL, long form
F4V73_RS16850 F4V73_RS16850 23.4 Morganella psychrotolerans - OmpA family protein
F4V73_RS16855 F4V73_RS16855 23.6 Morganella psychrotolerans tssL type VI secretion system protein TssL, short form
PMI_RS03645 PMI_RS03645 27.9 Proteus mirabilis HI4320 icmH type IVB secretion system protein IcmH/DotU

Distribution of the homologs in the orthogroup group_61

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_61

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37665 1.14e-14 76 40 1 105 1 yiaD Probable lipoprotein YiaD Escherichia coli (strain K12)
P38369 7.61e-14 77 36 0 106 3 tpn50 Outer membrane protein Tpn50 Treponema pallidum (strain Nichols)
P9WIU5 8.92e-14 75 41 1 104 1 arfA Peptidoglycan-binding protein ArfA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WIU4 8.92e-14 75 41 1 104 3 arfA Peptidoglycan-binding protein ArfA Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A1KH31 8.92e-14 75 41 1 104 1 arfA Peptidoglycan-binding protein ArfA Mycobacterium bovis (strain BCG / Pasteur 1173P2)
P65594 8.92e-14 75 41 1 104 3 arfA Peptidoglycan-binding protein ArfA Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P13794 7.42e-12 70 34 1 126 1 oprF Outer membrane porin F Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9I4L6 1.04e-10 63 42 1 76 1 yfiB Outer-membrane lipoprotein YfiB Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P46233 1.82e-10 65 36 2 97 3 motY Sodium-type flagellar protein MotY Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
A3M8K2 1.87e-10 66 30 2 159 3 omp38 Outer membrane protein Omp38 Acinetobacter baumannii (strain ATCC 17978 / DSM 105126 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
Q6RYW5 1.87e-10 66 30 2 159 1 omp38 Outer membrane protein Omp38 Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / JCM 6841 / CCUG 19606 / CIP 70.34 / NBRC 109757 / NCIMB 12457 / NCTC 12156 / 81)
Q7NFT5 2.04e-10 67 34 5 147 1 psaB Photosystem I P700 chlorophyll a apoprotein A2 Gloeobacter violaceus (strain ATCC 29082 / PCC 7421)
Q05146 6.35e-10 62 36 1 110 3 ompA Outer membrane protein A Bordetella avium
P22263 1.16e-09 63 33 1 121 3 oprF Outer membrane porin F Pseudomonas syringae pv. syringae
P07021 1.26e-09 60 34 0 104 3 yfiB Putative lipoprotein YfiB Escherichia coli (strain K12)
Q9S3P9 1.8e-09 62 34 2 103 3 motY Sodium-type flagellar protein MotY Vibrio anguillarum
A0A160PAH3 4.21e-09 62 33 1 127 1 omp38 Outer membrane protein Omp38 Acinetobacter sp. (strain Tol 5)
P0A3S8 2.14e-08 57 32 1 99 1 pal Peptidoglycan-associated lipoprotein Brucella suis biovar 1 (strain 1330)
P0A3S7 2.14e-08 57 32 1 99 1 pal Peptidoglycan-associated lipoprotein Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
P0A3S9 2.14e-08 57 32 1 99 1 pal Peptidoglycan-associated lipoprotein Brucella abortus biovar 1 (strain 9-941)
Q89AJ5 3.64e-08 56 32 2 106 3 pal Peptidoglycan-associated lipoprotein Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P37726 4.01e-08 58 33 1 105 1 oprF Outer membrane porin F Pseudomonas fluorescens
P28612 5.67e-08 57 31 1 116 1 motB Motility protein B Bacillus subtilis (strain 168)
O07887 4.31e-06 51 30 6 168 3 motB Motility protein B Treponema pallidum (strain Nichols)
P43840 1.68e-05 50 28 3 116 3 ompA Outer membrane protein P5 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P38368 2.07e-05 50 28 3 116 1 ompA Outer membrane protein P5 Haemophilus influenzae
P0A914 3.71e-05 47 27 2 101 3 pal Peptidoglycan-associated lipoprotein Shigella flexneri
P0A912 3.71e-05 47 27 2 101 1 pal Peptidoglycan-associated lipoprotein Escherichia coli (strain K12)
P0A913 3.71e-05 47 27 2 101 3 pal Peptidoglycan-associated lipoprotein Escherichia coli O157:H7
P45996 4.76e-05 49 29 3 116 1 ompA Outer membrane protein P5 Haemophilus influenzae
P84838 5.91e-05 49 30 2 111 1 GDI2185 Outer membrane protein Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / CCUG 37298 / CIP 103539 / LMG 7603 / PAl5)
Q8U9L5 6.48e-05 47 31 1 99 3 pal Peptidoglycan-associated lipoprotein Agrobacterium fabrum (strain C58 / ATCC 33970)
P39064 7.46e-05 48 29 2 108 3 ytxE Uncharacterized protein YtxE Bacillus subtilis (strain 168)
Q8K9L4 0.000164 47 27 3 122 3 ompA Outer membrane protein A Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q51886 0.000231 45 26 1 99 3 pal Peptidoglycan-associated lipoprotein Pasteurella multocida (strain Pm70)
P46827 0.000258 46 31 2 108 3 ytxE Uncharacterized 24.6 kDa protein in ccpA 3'region Priestia megaterium
P0A139 0.000336 45 29 2 101 3 pal Peptidoglycan-associated lipoprotein Pseudomonas putida
P0A138 0.000336 45 29 2 101 3 pal Peptidoglycan-associated lipoprotein Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
P0DJO6 0.000339 46 31 5 116 3 ompA Outer membrane protein A (Fragment) Shimwellia blattae
I2BAK7 0.000344 46 29 4 116 3 ompA Outer membrane protein A Shimwellia blattae (strain ATCC 29907 / DSM 4481 / JCM 1650 / NBRC 105725 / CDC 9005-74)
Q9I4Z4 0.000346 45 29 2 101 3 pal Peptidoglycan-associated lipoprotein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P26493 0.000522 44 25 2 113 3 pal Peptidoglycan-associated lipoprotein Legionella pneumophila
P0C8Z2 0.000622 45 28 4 116 3 ompA Outer membrane protein A (Fragment) Escherichia fergusonii
A0A2S4N3N0 0.000702 45 28 4 116 1 ompA Outer membrane protein A Shigella flexneri
P0A910 0.000743 45 28 4 116 1 ompA Outer membrane protein A Escherichia coli (strain K12)
P0A911 0.000743 45 28 4 116 3 ompA Outer membrane protein A Escherichia coli O157:H7
P24754 0.000795 45 27 4 116 3 ompA Outer membrane protein A (Fragment) Atlantibacter hermannii
P02935 0.000814 45 28 4 116 3 ompA Outer membrane protein A Shigella dysenteriae
B7LNW7 0.000836 45 28 4 116 3 ompA Outer membrane protein A Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
P24016 0.001 44 27 4 116 3 ompA Outer membrane protein A (Fragment) Citrobacter freundii

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS09425
Feature type CDS
Gene -
Product OmpA family protein
Location 1987257 - 1988891 (strand: 1)
Length 1635 (nucleotides) / 544 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_61
Orthogroup size 13
N. genomes 7

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Genomic region

Domains

PF00691 OmpA family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2885 Cell wall/membrane/envelope biogenesis (M) M Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins

Protein Sequence

MKTFASLKKWLIILFSIIALIMAGMAFYDKSNLFIWLSGLCGTLFMFTVIYSIRINEHDEVIVHQEDDVNEAPEIVFILGPYARTWFSQQDDDDTLRFDNKIIWMLINKPDDLHKQVSAIKQQHTHFQLSAVFPVLPDGHDTDAMLLNKIRGWTNSFSQNQFEHKIPCTLILYSRLSSQRFAHDPDKAIWLGQFNIYNTEPKVLRKEVTSLRQDLAAVYQQPHAVAAQHRNAMALSTLNWLEDAGILPEIETLFSESILDFTNLLFSDYGNGPTRHGAWSRWVQKKFAVLPRISAYLTLPPLPVNTGEAPVKVRKKTVEMTPVPYQTLRYSLLIVPLLIAGAMVSTLLWSLNFHVQRNETVNTLVQQFDVTPPNALQQRVEIIQQMKKLSQAIDNHETPYFFVIELAQPEIFTEKLDKSIAEFSRSPLYIAHDKNIVFDIGSSKLKRESTEYLMPVLQFIKQNPELKILIEGYTDNTGNDKNNINLSLNRAEQVRHWLQESSGLPESHFVTHGLGAQNPIADNDSQDGRDQNRRVEIKIYQENR

Flanking regions ( +/- flanking 50bp)

TGATTTTTGTCTGGCTTTATATTCGTGATACTTTGGATATGCTGATTTAAATGAAAACTTTCGCTTCATTAAAAAAATGGCTGATAATTTTATTCAGCATCATTGCACTTATCATGGCCGGTATGGCCTTTTATGATAAATCAAACCTGTTTATCTGGCTGAGTGGATTATGCGGCACATTATTTATGTTCACTGTTATTTATTCAATCCGGATAAATGAACATGATGAGGTGATAGTTCACCAGGAAGATGACGTTAATGAAGCGCCGGAAATTGTATTTATCCTTGGCCCTTATGCCAGAACCTGGTTTAGTCAGCAGGATGATGATGATACTCTGAGATTTGATAATAAAATCATCTGGATGCTGATTAATAAACCAGATGATTTACACAAACAGGTCTCCGCGATTAAACAGCAGCATACCCATTTTCAGCTCAGTGCTGTTTTTCCGGTACTTCCGGATGGTCATGATACTGATGCTATGCTATTAAACAAAATACGCGGCTGGACAAATTCATTTTCACAAAATCAATTTGAACATAAAATACCCTGCACCTTAATTTTATATTCCCGTCTCAGCAGCCAGCGATTTGCTCATGACCCGGATAAAGCTATCTGGTTAGGTCAGTTTAATATTTACAATACGGAACCTAAAGTATTACGCAAAGAAGTCACTTCCCTGCGACAAGATCTCGCCGCTGTCTATCAGCAACCTCACGCAGTGGCAGCGCAACATCGCAATGCGATGGCATTATCGACACTAAACTGGCTGGAAGATGCCGGAATTCTGCCGGAAATCGAGACATTATTCAGCGAAAGTATTCTCGATTTTACCAATCTGCTATTTTCTGATTACGGAAATGGCCCGACCCGGCACGGTGCCTGGTCCCGCTGGGTTCAGAAAAAATTTGCTGTTTTACCACGAATTTCCGCTTACCTGACGCTGCCGCCGCTGCCGGTAAATACCGGTGAAGCACCGGTTAAAGTAAGGAAAAAAACCGTTGAAATGACACCGGTACCTTATCAGACGCTGCGCTATTCACTCCTGATTGTCCCGCTGCTGATTGCTGGTGCAATGGTCAGTACACTGCTCTGGTCACTTAATTTTCATGTACAGAGAAATGAAACCGTTAATACATTGGTACAGCAATTTGATGTTACTCCGCCAAATGCATTACAGCAGCGGGTTGAAATAATTCAGCAGATGAAAAAATTATCTCAGGCTATAGACAATCATGAAACGCCCTATTTCTTTGTAATTGAACTTGCACAGCCTGAAATATTTACTGAAAAACTGGATAAATCAATTGCAGAATTTTCCCGTAGCCCGCTCTATATCGCTCATGATAAAAATATTGTTTTTGATATCGGCAGTTCAAAATTAAAACGGGAAAGTACAGAATATCTGATGCCGGTTCTGCAATTTATTAAGCAAAATCCGGAACTGAAAATTTTAATTGAAGGCTACACCGATAATACCGGTAATGATAAAAATAACATTAATTTGTCACTGAACCGGGCAGAACAAGTCAGACACTGGTTACAGGAATCGTCCGGACTACCGGAATCACATTTTGTGACCCACGGTCTGGGTGCCCAAAACCCGATAGCAGATAATGATTCTCAGGATGGACGGGATCAAAACCGCCGTGTTGAAATCAAAATTTATCAGGAAAATCGCTAGTCATATCTTTTGAGGATTATTATTTATGAGTAAAAGTAACGAATACATTA