PF07670


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07670, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 32 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07670
Description Nucleoside recognition

Occurence in the database

PF07670 is associated with 32 different proteins (see tab "Protein list" and "Profile")
The 32 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_24 FBDBKF_04810 167906 169168 -1 nupC Nucleoside permease NupC Morganella morganii S1
1 group_2723 FBDBKF_07425 169088 170020 1 Nucleoside transporter/FeoB GTPase Gate domain-containing protein Morganella morganii S1
2 group_1627 FBDBKF_10720 110084 112402 -1 feoB Fe(2+) transporter permease subunit FeoB Morganella morganii S1
3 group_24 FBDBKF_11115 47772 49040 1 nupC Nucleoside permease NupC Morganella morganii S1
4 group_24 FBDBKF_17770 15494 16771 -1 nupC Nucleoside permease NupC Morganella morganii S1
5 group_2723 EHELCC_03545 16166 17098 -1 Nucleoside transporter/FeoB GTPase Gate domain-containing protein Morganella morganii S2
6 group_24 EHELCC_05110 10428 11696 -1 nupC Nucleoside permease NupC Morganella morganii S2
7 group_24 EHELCC_06100 227363 228625 -1 nupC Nucleoside permease NupC Morganella morganii S2
8 group_24 EHELCC_09795 194926 196203 -1 nupC Nucleoside permease NupC Morganella morganii S2
9 group_1627 EHELCC_15055 110074 112392 -1 feoB Fe(2+) transporter permease subunit FeoB Morganella morganii S2
10 group_2723 NLDBIP_03545 15962 16894 -1 Nucleoside transporter/FeoB GTPase Gate domain-containing protein Morganella morganii S4
11 group_24 NLDBIP_05430 51501 52769 -1 nupC Nucleoside permease NupC Morganella morganii S4
12 group_24 NLDBIP_06420 268428 269690 -1 nupC Nucleoside permease NupC Morganella morganii S4
13 group_24 NLDBIP_10175 194926 196203 -1 nupC Nucleoside permease NupC Morganella morganii S4
14 group_1627 NLDBIP_14885 110074 112392 -1 feoB Fe(2+) transporter permease subunit FeoB Morganella morganii S4
15 group_24 LHKJJB_02310 29025 30293 -1 nupC Nucleoside permease NupC Morganella morganii S3
16 group_24 LHKJJB_03300 245952 247214 -1 nupC Nucleoside permease NupC Morganella morganii S3
17 group_24 LHKJJB_07580 21035 22312 1 nupC Nucleoside permease NupC Morganella morganii S3
18 group_2723 LHKJJB_09375 16076 17008 -1 Nucleoside transporter/FeoB GTPase Gate domain-containing protein Morganella morganii S3
19 group_1627 LHKJJB_14460 29334 31652 1 feoB Fe(2+) transporter permease subunit FeoB Morganella morganii S3
20 group_24 HKOGLL_06775 167816 169078 -1 nupC Nucleoside permease NupC Morganella morganii S5
21 group_24 HKOGLL_07130 21035 22312 1 nupC Nucleoside permease NupC Morganella morganii S5
22 group_2723 HKOGLL_09600 174044 174976 1 Nucleoside transporter/FeoB GTPase Gate domain-containing protein Morganella morganii S5
23 group_1627 HKOGLL_13080 29334 31652 1 feoB Fe(2+) transporter permease subunit FeoB Morganella morganii S5
24 group_24 HKOGLL_15690 52465 53733 -1 nupC Nucleoside permease NupC Morganella morganii S5
25 group_2723 F4V73_RS01650 363475 364407 1 nucleoside recognition domain-containing protein Morganella psychrotolerans
26 group_24 F4V73_RS08155 1695394 1696662 -1 NupC/NupG family nucleoside CNT transporter Morganella psychrotolerans
27 group_1627 F4V73_RS14435 113798 116116 -1 feoB Fe(2+) transporter permease subunit FeoB Morganella psychrotolerans
28 group_24 F4V73_RS15195 18475 19737 1 NupC/NupG family nucleoside CNT transporter Morganella psychrotolerans
29 group_2512 PMI_RS08990 1958663 1959847 -1 NupC/NupG family nucleoside CNT transporter Proteus mirabilis HI4320
30 group_24 PMI_RS11960 2645217 2646518 -1 NupC/NupG family nucleoside CNT transporter Proteus mirabilis HI4320
31 group_1627 PMI_RS14440 3203795 3206125 1 feoB Fe(2+) transporter permease subunit FeoB Proteus mirabilis HI4320