PF07670
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07670, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains
within the database. 32 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.
Description
External link |
PF07670 |
Description |
Nucleoside recognition |
Occurence in the database
PF07670 is associated with 32 different proteins (see tab "Protein list" and "Profile") |
The 32 proteins are classified into 4 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_24 |
FBDBKF_04810 |
167906 |
169168 |
-1 |
nupC |
Nucleoside permease NupC |
Morganella morganii S1 |
1 |
group_2723 |
FBDBKF_07425 |
169088 |
170020 |
1 |
|
Nucleoside transporter/FeoB GTPase Gate domain-containing protein |
Morganella morganii S1 |
2 |
group_1627 |
FBDBKF_10720 |
110084 |
112402 |
-1 |
feoB |
Fe(2+) transporter permease subunit FeoB |
Morganella morganii S1 |
3 |
group_24 |
FBDBKF_11115 |
47772 |
49040 |
1 |
nupC |
Nucleoside permease NupC |
Morganella morganii S1 |
4 |
group_24 |
FBDBKF_17770 |
15494 |
16771 |
-1 |
nupC |
Nucleoside permease NupC |
Morganella morganii S1 |
5 |
group_2723 |
EHELCC_03545 |
16166 |
17098 |
-1 |
|
Nucleoside transporter/FeoB GTPase Gate domain-containing protein |
Morganella morganii S2 |
6 |
group_24 |
EHELCC_05110 |
10428 |
11696 |
-1 |
nupC |
Nucleoside permease NupC |
Morganella morganii S2 |
7 |
group_24 |
EHELCC_06100 |
227363 |
228625 |
-1 |
nupC |
Nucleoside permease NupC |
Morganella morganii S2 |
8 |
group_24 |
EHELCC_09795 |
194926 |
196203 |
-1 |
nupC |
Nucleoside permease NupC |
Morganella morganii S2 |
9 |
group_1627 |
EHELCC_15055 |
110074 |
112392 |
-1 |
feoB |
Fe(2+) transporter permease subunit FeoB |
Morganella morganii S2 |
10 |
group_2723 |
NLDBIP_03545 |
15962 |
16894 |
-1 |
|
Nucleoside transporter/FeoB GTPase Gate domain-containing protein |
Morganella morganii S4 |
11 |
group_24 |
NLDBIP_05430 |
51501 |
52769 |
-1 |
nupC |
Nucleoside permease NupC |
Morganella morganii S4 |
12 |
group_24 |
NLDBIP_06420 |
268428 |
269690 |
-1 |
nupC |
Nucleoside permease NupC |
Morganella morganii S4 |
13 |
group_24 |
NLDBIP_10175 |
194926 |
196203 |
-1 |
nupC |
Nucleoside permease NupC |
Morganella morganii S4 |
14 |
group_1627 |
NLDBIP_14885 |
110074 |
112392 |
-1 |
feoB |
Fe(2+) transporter permease subunit FeoB |
Morganella morganii S4 |
15 |
group_24 |
LHKJJB_02310 |
29025 |
30293 |
-1 |
nupC |
Nucleoside permease NupC |
Morganella morganii S3 |
16 |
group_24 |
LHKJJB_03300 |
245952 |
247214 |
-1 |
nupC |
Nucleoside permease NupC |
Morganella morganii S3 |
17 |
group_24 |
LHKJJB_07580 |
21035 |
22312 |
1 |
nupC |
Nucleoside permease NupC |
Morganella morganii S3 |
18 |
group_2723 |
LHKJJB_09375 |
16076 |
17008 |
-1 |
|
Nucleoside transporter/FeoB GTPase Gate domain-containing protein |
Morganella morganii S3 |
19 |
group_1627 |
LHKJJB_14460 |
29334 |
31652 |
1 |
feoB |
Fe(2+) transporter permease subunit FeoB |
Morganella morganii S3 |
20 |
group_24 |
HKOGLL_06775 |
167816 |
169078 |
-1 |
nupC |
Nucleoside permease NupC |
Morganella morganii S5 |
21 |
group_24 |
HKOGLL_07130 |
21035 |
22312 |
1 |
nupC |
Nucleoside permease NupC |
Morganella morganii S5 |
22 |
group_2723 |
HKOGLL_09600 |
174044 |
174976 |
1 |
|
Nucleoside transporter/FeoB GTPase Gate domain-containing protein |
Morganella morganii S5 |
23 |
group_1627 |
HKOGLL_13080 |
29334 |
31652 |
1 |
feoB |
Fe(2+) transporter permease subunit FeoB |
Morganella morganii S5 |
24 |
group_24 |
HKOGLL_15690 |
52465 |
53733 |
-1 |
nupC |
Nucleoside permease NupC |
Morganella morganii S5 |
25 |
group_2723 |
F4V73_RS01650 |
363475 |
364407 |
1 |
|
nucleoside recognition domain-containing protein |
Morganella psychrotolerans |
26 |
group_24 |
F4V73_RS08155 |
1695394 |
1696662 |
-1 |
|
NupC/NupG family nucleoside CNT transporter |
Morganella psychrotolerans |
27 |
group_1627 |
F4V73_RS14435 |
113798 |
116116 |
-1 |
feoB |
Fe(2+) transporter permease subunit FeoB |
Morganella psychrotolerans |
28 |
group_24 |
F4V73_RS15195 |
18475 |
19737 |
1 |
|
NupC/NupG family nucleoside CNT transporter |
Morganella psychrotolerans |
29 |
group_2512 |
PMI_RS08990 |
1958663 |
1959847 |
-1 |
|
NupC/NupG family nucleoside CNT transporter |
Proteus mirabilis HI4320 |
30 |
group_24 |
PMI_RS11960 |
2645217 |
2646518 |
-1 |
|
NupC/NupG family nucleoside CNT transporter |
Proteus mirabilis HI4320 |
31 |
group_1627 |
PMI_RS14440 |
3203795 |
3206125 |
1 |
feoB |
Fe(2+) transporter permease subunit FeoB |
Proteus mirabilis HI4320 |