Homologs in group_24

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17 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04810 FBDBKF_04810 50.2 Morganella morganii S1 nupC Nucleoside permease NupC
FBDBKF_11115 FBDBKF_11115 60.9 Morganella morganii S1 nupC Nucleoside permease NupC
EHELCC_05110 EHELCC_05110 60.9 Morganella morganii S2 nupC Nucleoside permease NupC
EHELCC_06100 EHELCC_06100 50.2 Morganella morganii S2 nupC Nucleoside permease NupC
EHELCC_09795 EHELCC_09795 100.0 Morganella morganii S2 nupC Nucleoside permease NupC
NLDBIP_05430 NLDBIP_05430 60.9 Morganella morganii S4 nupC Nucleoside permease NupC
NLDBIP_06420 NLDBIP_06420 50.2 Morganella morganii S4 nupC Nucleoside permease NupC
NLDBIP_10175 NLDBIP_10175 100.0 Morganella morganii S4 nupC Nucleoside permease NupC
LHKJJB_02310 LHKJJB_02310 60.9 Morganella morganii S3 nupC Nucleoside permease NupC
LHKJJB_03300 LHKJJB_03300 50.2 Morganella morganii S3 nupC Nucleoside permease NupC
LHKJJB_07580 LHKJJB_07580 100.0 Morganella morganii S3 nupC Nucleoside permease NupC
HKOGLL_06775 HKOGLL_06775 50.2 Morganella morganii S5 nupC Nucleoside permease NupC
HKOGLL_07130 HKOGLL_07130 100.0 Morganella morganii S5 nupC Nucleoside permease NupC
HKOGLL_15690 HKOGLL_15690 60.9 Morganella morganii S5 nupC Nucleoside permease NupC
F4V73_RS08155 F4V73_RS08155 61.6 Morganella psychrotolerans - NupC/NupG family nucleoside CNT transporter
F4V73_RS15195 F4V73_RS15195 94.8 Morganella psychrotolerans - NupC/NupG family nucleoside CNT transporter
PMI_RS11960 PMI_RS11960 80.7 Proteus mirabilis HI4320 - NupC/NupG family nucleoside CNT transporter

Distribution of the homologs in the orthogroup group_24

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_24

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P44742 0.0 521 63 4 426 3 HI_0519 Uncharacterized transporter HI_0519 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O25792 1.41e-159 459 56 3 422 3 nupC Nucleoside permease NupC Helicobacter pylori (strain ATCC 700392 / 26695)
O32115 4.62e-159 457 57 3 423 3 yutK Uncharacterized transporter YutK Bacillus subtilis (strain 168)
P33021 3e-127 377 48 3 425 1 nupX Putative nucleoside permease NupX Escherichia coli (strain K12)
P33024 1.23e-120 360 48 2 425 1 psuT Putative pseudouridine transporter Escherichia coli (strain K12)
Q9UA35 2.15e-89 288 36 3 416 2 SLC28A3 Solute carrier family 28 member 3 Eptatretus stoutii
E9PXX9 2.22e-87 281 38 6 426 2 Slc28a1 Sodium/nucleoside cotransporter 1 Mus musculus
Q8VIH3 1.85e-86 280 39 4 423 2 Slc28a3 Solute carrier family 28 member 3 Rattus norvegicus
Q9HAS3 4.98e-86 279 39 4 423 1 SLC28A3 Solute carrier family 28 member 3 Homo sapiens
Q62674 1.11e-85 277 37 6 426 1 Slc28a1 Sodium/nucleoside cotransporter 1 Rattus norvegicus
Q9ERH8 6.03e-84 274 38 4 423 2 Slc28a3 Solute carrier family 28 member 3 Mus musculus
O62667 9.04e-84 272 37 5 414 2 SLC28A1 Sodium/nucleoside cotransporter 1 Sus scrofa
O00337 9.16e-84 272 37 6 426 1 SLC28A1 Sodium/nucleoside cotransporter 1 Homo sapiens
O88627 4.16e-83 271 36 4 424 1 Slc28a2 Sodium/nucleoside cotransporter 2 Mus musculus
Q62773 9.9e-83 270 36 4 424 1 Slc28a2 Sodium/nucleoside cotransporter 2 Rattus norvegicus
O43868 2.23e-82 269 36 5 425 1 SLC28A2 Sodium/nucleoside cotransporter 2 Homo sapiens
Q9MZT2 5.52e-79 259 34 5 425 2 SLC28A1 Sodium/nucleoside cotransporter 1 Oryctolagus cuniculus
P39141 1.24e-57 197 31 8 422 2 nupC Nucleoside permease NupC Bacillus subtilis (strain 168)
P0AFF2 9.41e-57 195 31 8 422 1 nupC Nucleoside permease NupC Escherichia coli (strain K12)
P0AFF3 9.41e-57 195 31 8 422 3 nupC Nucleoside permease NupC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P42312 8.03e-35 136 26 9 425 1 nupG Purine nucleoside transport protein NupG Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_17770
Feature type CDS
Gene nupC
Product Nucleoside permease NupC
Location 15494 - 16771 (strand: -1)
Length 1278 (nucleotides) / 425 (amino acids)

Contig

Accession contig_30
Length 36513 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_24
Orthogroup size 18
N. genomes 7

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Genomic region

Domains

PF01773 Na+ dependent nucleoside transporter N-terminus
PF07662 Na+ dependent nucleoside transporter C-terminus
PF07670 Nucleoside recognition

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1972 Nucleotide transport and metabolism (F) F Nucleoside permease NupC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03317 concentrative nucleoside transporter, CNT family - -

Protein Sequence

MQLLMSLVGMAALIFIAVLFSSDRRAIKLRTVVGAFIIQVLIGALVLYVPVGRKILLAMSDGVASVIGYGQKGMDFIFGGLVSDKMFEVFGGGGFVFALRVLPVIVFFSSLIAVLYYLGIMQLVIKILGGGLQKLLGTSRTESLSATANIFVGQTEAPLVVRPYISGMTNSELFAVMCGGLASVAGSVLAGYAQMGVPLEYLIAASFMAAPGGLLFAKLMVPETEHFDDRTEAMAGMAEEERPANIIDAAASGASSGMQLALNVGAMLLAFIALIALINGILGGVGGWFDYPQLSLELILGWVFSPIAFLIGVPWSEAMTAGSFIGQKIVVNEFVAFMNFGEYMKPDAQVIAAGLQPLSDHTKAIISFALCGFANLSSVAILLGGLGGMAPNRRKDVARLGMKAVMAGTLSNLMSATIAGFFLAL

Flanking regions ( +/- flanking 50bp)

CATGCGGAGCAGGACTATTAATCTACATTATCGTGAACAGGGATACTTCCATGCAACTCCTTATGAGTCTGGTCGGGATGGCAGCGCTGATCTTTATCGCAGTGCTGTTTTCAAGTGATCGCCGGGCAATCAAACTGCGGACTGTTGTCGGTGCCTTCATTATTCAGGTACTGATCGGTGCGCTGGTTCTCTATGTCCCGGTGGGACGTAAAATCCTCCTGGCAATGTCTGACGGTGTCGCCAGTGTTATCGGCTATGGCCAGAAAGGGATGGACTTTATTTTCGGCGGCCTGGTATCCGACAAAATGTTCGAGGTATTCGGCGGCGGCGGTTTCGTCTTTGCCCTGCGTGTTCTGCCGGTTATCGTTTTCTTCTCCTCGCTGATTGCCGTTCTGTATTACCTCGGCATTATGCAGCTTGTGATTAAAATTCTCGGCGGTGGCTTACAGAAACTGCTGGGCACCTCCCGTACCGAATCCCTGTCCGCGACAGCCAACATCTTTGTGGGACAAACTGAAGCCCCGCTGGTGGTGCGTCCGTATATCTCCGGGATGACCAACTCTGAACTGTTTGCGGTGATGTGTGGTGGTCTGGCATCCGTGGCCGGTTCAGTTCTCGCCGGGTATGCGCAGATGGGGGTACCGCTGGAGTACCTGATCGCGGCATCCTTTATGGCGGCACCGGGCGGTCTGCTGTTTGCGAAACTGATGGTGCCTGAAACCGAACACTTTGATGACCGTACCGAAGCAATGGCCGGTATGGCGGAAGAAGAGCGCCCTGCCAACATCATTGATGCGGCGGCAAGCGGTGCATCTTCCGGTATGCAGCTGGCACTGAACGTGGGTGCGATGCTGCTGGCGTTTATCGCGCTGATCGCCTTAATCAACGGTATCCTGGGCGGCGTCGGTGGCTGGTTTGACTATCCGCAGCTGTCACTGGAACTGATCCTCGGCTGGGTCTTCTCGCCAATCGCCTTCCTGATTGGTGTGCCGTGGAGTGAAGCTATGACCGCCGGTTCGTTCATCGGACAAAAAATTGTGGTCAACGAATTCGTTGCCTTCATGAACTTCGGTGAATACATGAAGCCGGATGCACAGGTGATTGCTGCCGGTTTACAACCGCTGTCTGATCACACCAAAGCGATTATCTCCTTTGCACTGTGCGGTTTTGCCAACCTCTCTTCTGTTGCTATCCTGCTGGGTGGCCTGGGCGGTATGGCACCTAACCGCCGTAAAGACGTGGCACGTCTGGGTATGAAAGCTGTGATGGCCGGTACTCTCTCCAACCTGATGAGTGCAACCATCGCCGGTTTCTTCCTGGCACTGTAATGCTCTTCCTGCACAGGTGAACCCGGTTCACCTGTGCATTTCACTGATTC