PF07338


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF07338, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 16 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF07338
Description YdgH/BhsA/McbA-like domain

Occurence in the database

PF07338 is associated with 16 different proteins (see tab "Protein list" and "Profile")
The 16 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_666 FBDBKF_02375 168443 169399 -1 ydgH DUF1471 domain-containing protein Morganella morganii S1
1 group_1420 FBDBKF_08770 134849 135100 1 YdgH/BhsA/McbA-like domain-containing protein Morganella morganii S1
2 group_666 EHELCC_02845 556263 557219 -1 ydgH DUF1471 domain-containing protein Morganella morganii S2
3 group_1420 EHELCC_12755 28625 28876 -1 YdgH/BhsA/McbA-like domain-containing protein Morganella morganii S2
4 group_666 NLDBIP_00615 122917 123873 1 ydgH DUF1471 domain-containing protein Morganella morganii S4
5 group_1420 NLDBIP_13095 28625 28876 -1 YdgH/BhsA/McbA-like domain-containing protein Morganella morganii S4
6 group_666 LHKJJB_01420 268812 269768 -1 ydgH DUF1471 domain-containing protein Morganella morganii S3
7 group_1420 LHKJJB_13460 133567 133818 1 YdgH/BhsA/McbA-like domain-containing protein Morganella morganii S3
8 group_666 HKOGLL_01460 274323 275279 -1 ydgH DUF1471 domain-containing protein Morganella morganii S5
9 group_1420 HKOGLL_11570 28625 28876 -1 YdgH/BhsA/McbA-like domain-containing protein Morganella morganii S5
10 group_666 F4V73_RS04760 1007330 1008286 -1 ydgH DUF1471 family protein YdgH Morganella psychrotolerans
11 group_1420 F4V73_RS09985 102912 103163 1 YdgH/BhsA/McbA-like domain containing protein Morganella psychrotolerans
12 group_3027 F4V73_RS10200 151158 151424 -1 DUF1471 domain-containing protein Morganella psychrotolerans
13 group_4182 F4V73_RS17020 29219 29536 1 DUF1471 domain-containing protein Morganella psychrotolerans
14 group_666 PMI_RS05785 1263865 1264818 -1 ydgH DUF1471 family protein YdgH Proteus mirabilis HI4320
15 group_1420 PMI_RS17175 3776242 3776493 1 DUF1471 domain-containing protein Proteus mirabilis HI4320