Homologs in group_738

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02375 FBDBKF_02375 69.0 Morganella morganii S1 ydgH DUF1471 domain-containing protein
EHELCC_02845 EHELCC_02845 69.0 Morganella morganii S2 ydgH DUF1471 domain-containing protein
NLDBIP_00615 NLDBIP_00615 69.0 Morganella morganii S4 ydgH DUF1471 domain-containing protein
LHKJJB_01420 LHKJJB_01420 69.0 Morganella morganii S3 ydgH DUF1471 domain-containing protein
HKOGLL_01460 HKOGLL_01460 69.0 Morganella morganii S5 ydgH DUF1471 domain-containing protein
F4V73_RS04760 F4V73_RS04760 66.1 Morganella psychrotolerans ydgH DUF1471 family protein YdgH

Distribution of the homologs in the orthogroup group_738

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_738

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76177 3.96e-114 335 59 3 317 1 ydgH Protein YdgH Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS05785
Feature type CDS
Gene ydgH
Product DUF1471 family protein YdgH
Location 1263865 - 1264818 (strand: -1)
Length 954 (nucleotides) / 317 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_738
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07338 YdgH/BhsA/McbA-like domain

Protein Sequence

MKLKTSVIAAAVLSLTNITVAQAAQELSPEQAAELKPFERITVIGRFNAIYEAADAVSRRADKIGADSFYIQGLDDISDSGNMSVTADLYRKDAPKATEEEYRVFHGVKELPKPEAILLQPFDTVTIHGYYPTTPDINNEIGKEAAKKGAASFFIVRNISVNDGGNQEVTAYIYKKDAPKRAIQSSEAVVPYDSDAGRALIAEGGSAANKVEKPGLASNSDFDRNVGVFAETQSSGKSGRYTVTLPDGTEIQEVNKAAAALMEPFDTITFSGYFVNSPEVSYQVAKRAAEKGAKYYHITREWQSNGGTVTITADLFK

Flanking regions ( +/- flanking 50bp)

TATGTTCAGCACATGACCAATATTAATTGCGCAAGGCGGAAGGATTTTGTATGAAGCTGAAAACCTCAGTCATCGCAGCAGCGGTGTTATCTTTAACTAATATTACTGTTGCGCAGGCTGCACAGGAACTGTCTCCAGAACAAGCGGCAGAGCTAAAACCATTTGAAAGAATTACAGTCATCGGTCGTTTTAATGCGATTTATGAAGCAGCTGACGCAGTATCTCGTCGTGCTGATAAAATCGGTGCTGATAGTTTTTACATTCAAGGTCTAGATGATATCAGTGATAGTGGCAACATGAGTGTGACTGCCGATCTGTATCGAAAAGATGCACCAAAAGCAACTGAAGAAGAATACCGCGTATTTCATGGTGTAAAAGAATTACCAAAACCTGAAGCTATTTTGCTACAGCCTTTTGATACCGTTACTATTCATGGTTACTATCCAACAACACCTGATATTAATAACGAAATCGGGAAAGAAGCAGCAAAAAAAGGTGCAGCATCATTCTTTATTGTCCGTAATATTTCGGTAAATGATGGTGGTAACCAAGAAGTTACTGCTTATATCTATAAAAAAGATGCCCCTAAAAGAGCCATACAGTCTTCAGAAGCCGTGGTTCCTTATGACTCTGATGCGGGTCGAGCGCTTATTGCCGAAGGTGGAAGTGCAGCCAATAAAGTTGAAAAACCAGGACTTGCGTCAAATAGTGACTTTGATAGAAATGTAGGTGTATTTGCTGAAACACAATCATCAGGTAAAAGCGGACGTTACACTGTCACCTTACCTGATGGCACTGAAATTCAAGAGGTTAATAAAGCAGCGGCTGCATTAATGGAACCTTTTGATACCATTACTTTCAGTGGTTATTTTGTGAACTCACCGGAAGTTTCTTATCAAGTTGCTAAACGTGCCGCAGAGAAAGGTGCAAAATACTACCATATTACTCGTGAATGGCAGAGTAATGGTGGTACGGTAACAATCACCGCTGATTTATTTAAATAATCTGTTGTTACTTTCTCTTTTAAAAACCTTGCTCTATGCAAGGTTTTTTT