Homologs in group_738

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02375 FBDBKF_02375 100.0 Morganella morganii S1 ydgH DUF1471 domain-containing protein
EHELCC_02845 EHELCC_02845 100.0 Morganella morganii S2 ydgH DUF1471 domain-containing protein
NLDBIP_00615 NLDBIP_00615 100.0 Morganella morganii S4 ydgH DUF1471 domain-containing protein
LHKJJB_01420 LHKJJB_01420 100.0 Morganella morganii S3 ydgH DUF1471 domain-containing protein
F4V73_RS04760 F4V73_RS04760 92.5 Morganella psychrotolerans ydgH DUF1471 family protein YdgH
PMI_RS05785 PMI_RS05785 69.0 Proteus mirabilis HI4320 ydgH DUF1471 family protein YdgH

Distribution of the homologs in the orthogroup group_738

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_738

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76177 1.25e-117 344 62 3 318 1 ydgH Protein YdgH Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_01460
Feature type CDS
Gene ydgH
Product DUF1471 domain-containing protein
Location 274323 - 275279 (strand: -1)
Length 957 (nucleotides) / 318 (amino acids)
In genomic island -

Contig

Accession ZDB_679
Length 398279 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_738
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF07338 YdgH/BhsA/McbA-like domain

Protein Sequence

MKLKTTVIASAMFFSFTSLLPAQAAQELTPEQAAQYQPFERIAVTGRFNAIYEAAAAVSRKADKMGADAFYIQSLDDLNNNGNMRVVADVYHRDAPPAEEKGYRQFRGVNELPEKDAIGLQPFDTVTVSGFFANSPDLNDAIAKEAVKKDAASFFIVRNIFTNDGGNQLVTAYVYKADAPKRVLQTEEALIPADSDAGRAALAAGGEAAKQVEIPGVASSTDTAGNNVGRFFETQSSRSGRYTVTLPDGTQVQELNKASAAVMAPFDSVTFTGYYTTSPEVSYQVAKRAAAKGAKYYHITRQWQSSGGNVTISADLFK

Flanking regions ( +/- flanking 50bp)

CAGGTTCAGCACGTTATGAATATTAATTGCGCAAGGCGGAAGGATTTTGTATGAAGCTGAAAACAACGGTCATCGCATCTGCGATGTTTTTTTCATTTACCAGTCTGCTCCCCGCTCAGGCGGCACAGGAATTAACACCGGAACAGGCCGCTCAGTACCAGCCTTTCGAGCGGATTGCAGTTACAGGGCGTTTTAATGCTATTTATGAAGCCGCAGCTGCCGTTTCGCGTAAAGCAGACAAAATGGGTGCCGATGCTTTCTATATCCAGAGCCTCGATGATCTGAACAATAACGGCAATATGCGTGTTGTTGCGGATGTTTACCACCGCGATGCACCACCGGCCGAGGAAAAAGGCTACCGCCAGTTCCGTGGCGTTAATGAATTACCTGAGAAAGATGCTATCGGCCTTCAGCCGTTTGATACCGTCACTGTCAGCGGCTTTTTTGCCAACAGTCCTGATCTGAACGATGCTATCGCCAAAGAAGCAGTGAAAAAAGATGCGGCCTCTTTCTTTATCGTCCGTAATATTTTCACCAACGATGGCGGTAACCAGCTGGTCACTGCATATGTCTATAAAGCGGATGCACCAAAACGTGTACTGCAGACAGAAGAAGCGCTGATCCCTGCGGATTCTGATGCCGGTCGTGCCGCACTGGCTGCCGGTGGCGAAGCTGCCAAACAGGTCGAAATCCCTGGTGTGGCCTCCTCTACTGACACCGCCGGTAACAATGTCGGTCGTTTCTTTGAAACCCAGTCCTCCCGCAGCGGCCGTTATACCGTGACTCTGCCGGACGGCACCCAGGTTCAGGAACTGAACAAGGCGTCAGCCGCTGTTATGGCACCGTTTGACAGCGTAACCTTTACCGGTTACTACACCACGTCACCGGAAGTCTCTTATCAGGTCGCCAAACGTGCGGCAGCCAAAGGGGCGAAATATTATCATATCACCCGTCAGTGGCAGTCCAGCGGCGGTAACGTGACTATCAGCGCTGATTTATTTAAATAATCACCGCCTGACAGTTCACCGGAAAAAGCGTATCTCTGATACGCTTTTTT