Orthogroup:group_3032



Homologs in group_3032

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_18080 FBDBKF_18080 Morganella morganii S1 argE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase
EHELCC_16780 EHELCC_16780 Morganella morganii S2 argE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase
NLDBIP_17670 NLDBIP_17670 Morganella morganii S4 argE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase
LHKJJB_17590 LHKJJB_17590 Morganella morganii S3 argE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase
HKOGLL_17405 HKOGLL_17405 Morganella morganii S5 argE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase
PMI_RS01385 PMI_RS01385 Proteus mirabilis HI4320 - Zn-dependent hydrolase

Distribution of group_3032 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3032 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3032

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3032.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 argE 5
2 - 1

Product

# Product Occurence
1 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase 5
2 Zn-dependent hydrolase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0624 6 E Amino acid transport and metabolism (E) Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase or related deacylase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06016 5 beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87] Pyrimidine metabolism
beta-Alanine metabolism
Pantothenate and CoA biosynthesis
Metabolic pathways
Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01546 6 Peptidase family M20/M25/M40
PF07687 6 Peptidase dimerisation domain

Annotations of the 15 SwissProt hits

Annotation Number of occurrences
Allantoate amidohydrolase 2
Allantoate deiminase 1
Allantoate deiminase 1 1
Allantoate deiminase 2 1
N-carbamoyl-L-amino acid hydrolase 2
N-carbamoyl-L-amino-acid hydrolase 3
Probable allantoate deiminase 1
Putative hydrolase MSMEG_3995/MSMEI_3903 1
Uncharacterized hydrolase HI_0588 1
Ureidoglycolate hydrolase 2

Protein length

Min length 418
Max length 419
Mean length (sd) 418.8 (0.4)
Median length 419.0

Protein length distribution