PF05860


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF05860, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 37 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF05860
Description TPS secretion domain

Occurence in the database

PF05860 is associated with 37 different proteins (see tab "Protein list" and "Profile")
The 37 proteins are classified into 5 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_26 FBDBKF_12005 50701 51978 1 Filamentous hemagglutinin Morganella morganii S1
1 group_1783 FBDBKF_13000 100290 104924 -1 Hemolysin Morganella morganii S1
2 group_1837 FBDBKF_13615 100369 101703 1 Filamentous hemagglutinin Morganella morganii S1
3 group_26 FBDBKF_16585 46734 47291 -1 Hemolysin Morganella morganii S1
4 group_1783 EHELCC_06315 270322 274956 -1 Hemolysin Morganella morganii S2
5 group_26 EHELCC_08450 163720 164277 -1 Hemolysin Morganella morganii S2
6 group_2912 EHELCC_08455 164540 169831 1 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like TPS domain-containing protein Morganella morganii S2
7 group_1837 EHELCC_08480 173488 174822 -1 Filamentous hemagglutinin Morganella morganii S2
8 group_26 EHELCC_14300 82727 84004 -1 Filamentous hemagglutinin Morganella morganii S2
9 group_1783 NLDBIP_06635 311387 316021 -1 Hemolysin Morganella morganii S4
10 group_26 NLDBIP_08775 163720 164277 -1 Hemolysin Morganella morganii S4
11 group_2912 NLDBIP_08780 164540 169831 1 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like TPS domain-containing protein Morganella morganii S4
12 group_1837 NLDBIP_08805 173488 174822 -1 Filamentous hemagglutinin Morganella morganii S4
13 group_26 NLDBIP_15395 86664 87941 -1 Filamentous hemagglutinin Morganella morganii S4
14 group_1783 LHKJJB_03515 288911 293545 -1 Hemolysin Morganella morganii S3
15 group_1837 LHKJJB_05460 82337 83671 1 Filamentous hemagglutinin Morganella morganii S3
16 group_2912 LHKJJB_05485 87328 92619 -1 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like TPS domain-containing protein Morganella morganii S3
17 group_26 LHKJJB_05490 92882 93439 1 Hemolysin Morganella morganii S3
18 group_26 LHKJJB_15215 50701 51978 1 Filamentous hemagglutinin Morganella morganii S3
19 group_26 HKOGLL_05425 148311 148868 -1 Hemolysin Morganella morganii S5
20 group_2912 HKOGLL_05430 149131 154422 1 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like TPS domain-containing protein Morganella morganii S5
21 group_1837 HKOGLL_05455 158079 159413 -1 Filamentous hemagglutinin Morganella morganii S5
22 group_1783 HKOGLL_06990 210775 215409 -1 Hemolysin Morganella morganii S5
23 group_26 HKOGLL_14335 37364 38641 1 Filamentous hemagglutinin Morganella morganii S5
24 group_26 F4V73_RS03085 659715 660635 -1 filamentous hemagglutinin N-terminal domain-containing protein Morganella psychrotolerans
25 group_26 F4V73_RS03115 666326 666877 -1 filamentous hemagglutinin N-terminal domain-containing protein Morganella psychrotolerans
26 group_1837 F4V73_RS03135 670150 671472 -1 filamentous hemagglutinin N-terminal domain-containing protein Morganella psychrotolerans
27 group_1837 F4V73_RS03150 672353 673681 -1 filamentous hemagglutinin N-terminal domain-containing protein Morganella psychrotolerans
28 group_3732 F4V73_RS12495 82783 90567 -1 hemagglutinin repeat-containing protein Morganella psychrotolerans
29 group_26 F4V73_RS14650 164318 165604 -1 filamentous hemagglutinin N-terminal domain-containing protein Morganella psychrotolerans
30 group_1783 F4V73_RS16185 40653 45293 -1 hemagglutinin repeat-containing protein Morganella psychrotolerans
31 group_2912 PMI_RS02925 641233 646641 1 DUF637 domain-containing protein Proteus mirabilis HI4320
32 group_26 PMI_RS03490 777027 778295 -1 filamentous hemagglutinin N-terminal domain-containing protein Proteus mirabilis HI4320
33 group_26 PMI_RS08095 1767216 1768472 -1 filamentous hemagglutinin N-terminal domain-containing protein Proteus mirabilis HI4320
34 group_1783 PMI_RS10140 2214966 2219699 1 hpmA calcium-independent hemolysin HpmA Proteus mirabilis HI4320
35 group_26 PMI_RS14040 3116611 3118305 -1 filamentous hemagglutinin N-terminal domain-containing protein Proteus mirabilis HI4320
36 group_26 PMI_RS14405 3194336 3196852 -1 filamentous hemagglutinin N-terminal domain-containing protein Proteus mirabilis HI4320