Homologs in group_1783

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13000 FBDBKF_13000 76.9 Morganella morganii S1 - Hemolysin
EHELCC_06315 EHELCC_06315 76.9 Morganella morganii S2 - Hemolysin
NLDBIP_06635 NLDBIP_06635 76.8 Morganella morganii S4 - Hemolysin
LHKJJB_03515 LHKJJB_03515 76.8 Morganella morganii S3 - Hemolysin
HKOGLL_06990 HKOGLL_06990 76.8 Morganella morganii S5 - Hemolysin
PMI_RS10140 PMI_RS10140 39.5 Proteus mirabilis HI4320 hpmA calcium-independent hemolysin HpmA

Distribution of the homologs in the orthogroup group_1783

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1783

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P15320 0.0 944 38 14 1524 1 shlA Hemolysin Serratia marcescens
P16466 0.0 924 37 15 1540 1 hpmA Hemolysin Proteus mirabilis
C4SGN7 8.3e-38 160 38 12 338 3 cdiA tRNA nuclease CdiA Yersinia mollaretii (strain ATCC 43969 / DSM 18520 / CIP 103324 / CNY 7263 / WAIP 204)
Q7CGD9 1.5e-37 159 38 7 284 3 cdiA Toxin CdiA Yersinia pestis
Q7CGD9 0.000188 50 26 7 261 3 cdiA Toxin CdiA Yersinia pestis
D5CBA0 5.59e-33 144 34 15 370 1 cdiA 16S rRNA endonuclease CdiA Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCTC 10005 / WDCM 00083 / NCDC 279-56)
D5CBA0 5.57e-08 62 25 9 409 1 cdiA 16S rRNA endonuclease CdiA Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCTC 10005 / WDCM 00083 / NCDC 279-56)
Q0T963 2.64e-30 135 37 14 288 1 cdiA tRNA nuclease CdiA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q0T963 8.41e-07 58 25 22 684 1 cdiA tRNA nuclease CdiA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A0A1S4NYE3 3.1e-30 135 38 14 288 1 cdiA tRNA nuclease CdiA Escherichia coli (strain STEC_O31)
B3BM48 3.28e-30 135 37 14 288 1 cdiA1 tRNA nuclease CdiA Escherichia coli O157:H7 (strain EC869)
P0DSI1 9.62e-30 133 38 13 275 1 cdiA tRNA nuclease CdiA Escherichia coli (strain NC101)
P0DSI1 1.16e-06 57 24 12 473 1 cdiA tRNA nuclease CdiA Escherichia coli (strain NC101)
Q3YL96 2.15e-29 132 37 14 288 1 cdiA Toxin CdiA Escherichia coli
Q3YL96 0.000285 49 24 29 802 1 cdiA Toxin CdiA Escherichia coli
P12255 6.47e-29 130 32 9 320 1 fhaB Filamentous hemagglutinin Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
I1WVY3 1.04e-27 126 29 15 464 1 cdiA2 tRNA nuclease CdiA-2 Burkholderia pseudomallei (strain 1026b)
Q06277 3.25e-16 89 32 8 253 1 ibpA Protein adenylyltransferase and cysteine protease IbpA Histophilus somni (strain 2336)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16185
Feature type CDS
Gene -
Product hemagglutinin repeat-containing protein
Location 40653 - 45293 (strand: -1)
Length 4641 (nucleotides) / 1546 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1783
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF05860 TPS secretion domain
PF13332 Hemagglutinin repeat

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3210 Intracellular trafficking, secretion, and vesicular transport (U) U Large exoprotein involved in heme utilization or adhesion

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11016 hemolysin Bacterial secretion system -

Protein Sequence

MKKERFKLSSSGKIAAWMALAFVTFNCNAVGIVADTGLNGPGVSQVNGTDIINIVAPNNNGLSHNQYRDFNVDNQGAVFNNALNGGQSQLAGHLEANNHLNGQAAGVILNEVISRNPSLLLGQQEVFGMAADLILANPNGISCQGCGFINTNNAALVVGNPLIDKGMINAYSTLDNYNQLTIGNKGIATGQVLDLVAPAINADGAIRAGTLNAITGNNIVSADMQTITAGKNAVPLDSYYLGGMRAGRIRLVNTAQGSGVKLSGTIDAVNGFDAQAQGALTLTAAQVTGGDINLNGGSLRTEGLLRRDHHQTENKHSGQTLTTTTNQARYTRTTLDGKNITLVAAQDARLTGTDVTGQNVTIQGADVTLDSDQVAQSESRTHNQWKMSWENNETRKDESVNQQTTAVRAAGDIRITAKTGDIVMKGATADAGNHLSADAAGSIHLQGVKNTRTQTVSGNKRNESAKLHSGTWADVTSREQLVRTQLSAGGNLGLNAGSDINAQAAKAQAGQDMILNSRNDLRIGTQTATQHEGHTSNITSWGGIGGGQRKNTATTEEAAQGSEFTAGGKLLLSGGNAVVVTGSKVKGTQDSLVQTGRGNLVIENGVSRTAQHIDNRNGGAFNITSSTLRENSEDTRIVRSELKSDADLRLAGKNDITITGSLIESAGALHIDTLGDINVRAAQAKKQSDKTETELKISGYAKEQEDKQYRAGLDIRHTTDSEKQETVQNQGSELKGGSVTATAGNDITLTGSSLTTTQGDAALSAENIHLNAADNSDTRTQQKKETHGGVYLTGGADKIGGGLSVGHTDTRQEQEKHQAVTSGTQVQGDLTLTAKNTITQEGAAHTVGGKYTETGDTVVHQAAHNSDKTTETTKGGEGNLGISLDYSKISRPLVNAGEKVAEGNIAAAADSTSAVGLPDIGVDLSGKGENRQTVTQNSKAVTTTIQSGSTQIKAGNSVRDEGTQYRADNGGIVIDTGDYLSAAAADSHQESANVAEGSGSLRVATSTGQDISVSAEGRGRNHATTESSSNAVTGSLSAKEGITINAGRDITLQGGTLRSDESNVALRAGDNLTLDQANDTHSKTVNGFDANAKVNVESVNLKNAGGGLGGGREVYNETGTTAKTGLIDGSKGVVLQAGNDLTLKGADLSSDGDITVKSGHRTDLNSAESTNTVTGHKWNAGVQGSGGNTDTGSKLGGGGDFAVSKQAENQTDQRGGSIRSGGTASVSADGMRGDALHLKGTQIDAQNTALTARDGGIVIESAQKTTDKANWNAGANLNIGTSRSKENPETGSRHNVSAGLKGGIDNSQTVTQKNASVESKNLTLNSRNDTQILGGNVTADNVSGRVGGDLVIESRTNTQAVTKMDVDLSLNNTNEESSSTTAKLANAGTPVYADKIKASLESGLDSAADSVRDSAGSGAGVVADKVKSGLTAPAGTSGKIKGAFETRSVEQVRQQSGLTAREQGTLRTGGSTVLTGAAIGGIADVANGRTETRSVAVKNTGTRVHGELPLNAGQAISAVKDGLLNGKSPVGISVTDEHSSVESRVK

Flanking regions ( +/- flanking 50bp)

GATATCAGTTCTGATCACATTCGTCTGTTGTTGGATGGTAAGGAAATAATATGAAAAAAGAACGGTTTAAACTCTCTTCTTCCGGAAAAATCGCCGCGTGGATGGCGCTGGCGTTTGTCACCTTTAACTGCAATGCTGTGGGTATTGTGGCGGATACGGGTCTGAACGGACCCGGGGTTTCTCAGGTAAACGGAACAGATATTATTAATATTGTGGCACCGAATAATAACGGACTGTCACATAACCAATATCGTGATTTTAATGTGGATAATCAGGGGGCGGTCTTTAATAACGCCCTGAACGGCGGGCAGTCACAGCTTGCAGGACATCTGGAGGCAAACAATCACCTGAACGGGCAGGCGGCCGGGGTTATCCTCAATGAAGTGATCAGCCGCAATCCGTCTCTGCTGCTGGGGCAGCAGGAAGTATTCGGCATGGCGGCGGATCTGATCCTTGCGAACCCGAACGGGATCAGTTGCCAGGGCTGCGGATTTATTAATACCAACAACGCGGCGCTGGTGGTCGGTAATCCGTTGATTGACAAAGGGATGATCAATGCCTACAGCACGCTGGATAATTATAATCAGCTGACGATCGGCAACAAAGGGATCGCCACCGGGCAGGTGTTGGATCTGGTTGCGCCCGCTATTAATGCAGACGGAGCGATCCGCGCCGGTACGCTGAATGCGATCACCGGTAACAATATTGTCTCCGCCGATATGCAGACGATTACTGCCGGGAAAAATGCCGTACCGCTGGACAGTTACTATCTGGGCGGAATGCGGGCAGGACGTATCCGCCTGGTGAACACCGCGCAGGGCAGTGGTGTGAAACTCTCCGGAACAATTGATGCGGTGAATGGTTTTGATGCGCAGGCACAAGGCGCGCTGACACTCACGGCAGCACAGGTAACCGGCGGGGATATCAATCTGAACGGCGGTTCGCTGCGTACAGAAGGTCTGTTGCGCCGTGACCATCATCAGACAGAGAATAAACACAGCGGGCAGACACTCACAACCACCACAAACCAGGCGCGCTATACCCGCACCACGCTGGACGGCAAAAATATCACCTTAGTGGCAGCACAGGATGCGCGACTGACCGGGACTGATGTGACCGGGCAGAATGTCACTATTCAGGGCGCGGACGTCACTCTGGACAGCGACCAGGTCGCGCAATCAGAAAGCCGGACCCATAATCAGTGGAAAATGTCCTGGGAGAATAACGAAACCCGCAAAGATGAAAGTGTAAATCAGCAAACCACGGCGGTTCGTGCCGCCGGTGATATCCGTATTACCGCTAAAACCGGTGATATTGTGATGAAAGGGGCAACCGCAGACGCGGGCAATCATCTGAGTGCTGATGCAGCGGGCAGTATTCATCTTCAGGGCGTGAAAAACACCCGTACACAAACCGTGTCCGGCAATAAACGTAATGAATCGGCAAAACTGCACAGTGGCACATGGGCAGATGTGACCTCCCGTGAGCAGCTTGTCAGAACGCAGCTGAGTGCGGGCGGAAACCTCGGACTGAATGCGGGCAGTGATATCAATGCACAGGCAGCAAAGGCACAGGCCGGGCAGGATATGATCCTGAACAGCCGCAATGACCTGCGCATCGGCACGCAAACCGCCACGCAACATGAGGGACACACCAGTAATATCACCTCCTGGGGCGGGATAGGCGGCGGGCAGCGTAAAAACACGGCAACCACAGAAGAAGCGGCTCAGGGATCTGAATTTACCGCAGGCGGTAAACTTCTGCTTTCCGGCGGGAACGCCGTGGTGGTGACCGGCAGTAAAGTAAAAGGCACACAGGACAGTCTGGTACAGACCGGGCGCGGTAATCTGGTGATAGAGAACGGTGTCAGCCGGACGGCACAACATATTGATAACCGTAATGGCGGCGCATTTAATATCACCAGCAGCACGCTGCGCGAAAACAGTGAAGATACCCGCATTGTGCGCAGTGAGCTGAAATCAGATGCAGATCTGCGGCTGGCAGGGAAAAATGATATCACTATCACCGGCAGTCTGATTGAAAGTGCGGGCGCACTTCACATTGATACCCTTGGTGATATTAATGTCCGTGCGGCGCAGGCAAAAAAACAGTCTGACAAAACAGAGACTGAACTGAAAATCAGCGGCTATGCCAAAGAGCAGGAAGATAAACAGTACCGCGCCGGGCTGGATATCCGCCATACCACCGACTCTGAAAAACAGGAAACAGTTCAGAATCAGGGAAGTGAACTGAAAGGCGGCAGTGTTACCGCGACTGCCGGGAACGATATCACTCTGACGGGCTCATCTCTGACAACGACACAAGGTGATGCTGCGCTTTCGGCGGAGAATATTCACCTGAATGCGGCGGACAACAGCGACACCCGTACTCAGCAGAAAAAGGAAACGCACGGCGGGGTTTATCTCACGGGCGGAGCCGATAAAATCGGCGGCGGACTGAGTGTGGGTCATACTGACACCCGACAGGAGCAGGAGAAGCATCAGGCTGTAACATCCGGCACGCAGGTGCAGGGTGATTTAACTCTGACCGCTAAAAATACCATTACACAGGAAGGTGCGGCACACACAGTCGGCGGAAAATACACCGAAACGGGTGATACCGTTGTGCATCAGGCCGCGCACAACAGTGATAAAACCACTGAAACCACCAAAGGCGGGGAAGGTAATCTCGGTATTTCTCTTGATTACAGTAAGATTTCCCGTCCGCTGGTGAATGCCGGTGAAAAAGTGGCAGAAGGAAATATCGCTGCCGCCGCAGACAGCACAAGTGCGGTCGGGCTGCCGGATATTGGTGTGGATCTGAGTGGCAAAGGTGAAAACCGTCAAACCGTTACGCAGAACAGCAAAGCGGTGACCACCACGATTCAGTCCGGATCCACGCAGATTAAGGCGGGGAATAGTGTCCGCGATGAAGGCACGCAATATCGTGCAGATAACGGCGGTATTGTGATCGATACCGGCGATTATCTGTCAGCCGCAGCGGCAGATAGCCATCAGGAGTCTGCCAATGTTGCTGAAGGCTCCGGCAGCCTGCGTGTTGCGACCTCCACCGGACAGGATATTTCTGTCAGTGCAGAAGGTCGCGGACGTAACCACGCCACCACGGAAAGCAGCAGCAACGCAGTAACCGGTTCACTCTCTGCAAAAGAGGGTATTACTATTAACGCCGGGCGCGATATCACGTTGCAGGGCGGTACATTGCGCAGTGATGAAAGCAATGTTGCGCTGCGGGCGGGGGATAATCTGACACTGGATCAGGCTAATGACACCCACAGCAAAACAGTTAACGGATTTGATGCCAATGCGAAGGTAAATGTTGAATCAGTTAATCTGAAAAATGCGGGCGGCGGTCTTGGCGGCGGACGTGAAGTATATAACGAAACCGGCACAACGGCGAAAACCGGGCTTATCGATGGCAGCAAAGGTGTTGTTCTGCAAGCCGGAAATGACCTGACACTCAAAGGTGCTGATCTGAGCAGTGACGGGGATATCACGGTAAAAAGCGGGCACCGGACCGATCTCAACAGTGCTGAAAGCACAAATACGGTTACCGGTCACAAGTGGAACGCGGGTGTGCAGGGCAGCGGCGGTAACACCGATACCGGCAGTAAACTCGGCGGCGGTGGTGACTTCGCTGTCAGTAAACAGGCAGAGAATCAAACTGATCAGCGCGGCGGCAGTATCCGCAGCGGGGGAACCGCGTCTGTTTCCGCAGACGGTATGCGCGGTGATGCTCTGCATCTGAAAGGGACTCAGATTGATGCACAAAATACCGCACTGACAGCAAGGGATGGCGGGATTGTCATTGAATCAGCCCAAAAAACCACAGACAAAGCCAACTGGAATGCGGGCGCAAACCTGAACATCGGCACCAGCCGCAGTAAGGAAAACCCGGAAACCGGCTCGCGGCATAATGTCAGCGCCGGGCTGAAAGGCGGGATCGATAACAGTCAGACCGTGACACAGAAAAATGCGTCAGTTGAAAGCAAAAACCTGACACTGAACAGCCGGAACGACACTCAGATCCTCGGGGGAAATGTTACGGCGGATAATGTCAGCGGGCGTGTCGGCGGGGATCTGGTGATAGAGAGCCGGACCAATACGCAGGCAGTCACAAAGATGGATGTTGATCTTTCTCTCAATAATACGAATGAGGAGAGCAGCAGCACAACGGCAAAACTGGCGAATGCCGGAACACCGGTGTATGCGGATAAAATCAAAGCAAGCCTAGAAAGCGGATTGGACAGTGCCGCTGATTCTGTCAGAGACAGCGCCGGTTCCGGCGCAGGCGTTGTGGCGGATAAAGTAAAATCCGGACTGACGGCACCTGCCGGAACCAGCGGAAAGATCAAAGGTGCGTTTGAAACCCGCTCAGTTGAGCAGGTGAGACAACAATCCGGACTGACAGCCCGGGAGCAGGGCACTCTGCGCACCGGCGGCAGTACGGTTCTCACCGGGGCTGCAATTGGCGGAATAGCGGATGTGGCAAACGGGCGGACAGAAACCCGCTCAGTGGCGGTAAAAAACACCGGCACCCGTGTTCACGGCGAATTGCCGCTCAATGCCGGGCAGGCAATCAGTGCGGTCAAAGACGGATTGCTGAACGGGAAATCCCCTGTAGGCATTTCGGTCACGGATGAGCATAGCAGCGTGGAAAGTCGGGTGAAATAATCCCGTCTTTGCTCTGTAAAACCAAACGGCTCTTCGCTATTAAGGAAGAG