Homologs in group_21

Help

14 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13615 FBDBKF_13615 39.3 Morganella morganii S1 - Filamentous hemagglutinin
FBDBKF_16585 FBDBKF_16585 100.0 Morganella morganii S1 - Hemolysin
EHELCC_08450 EHELCC_08450 100.0 Morganella morganii S2 - Hemolysin
EHELCC_08480 EHELCC_08480 39.3 Morganella morganii S2 - Filamentous hemagglutinin
NLDBIP_08805 NLDBIP_08805 39.3 Morganella morganii S4 - Filamentous hemagglutinin
LHKJJB_05460 LHKJJB_05460 39.3 Morganella morganii S3 - Filamentous hemagglutinin
LHKJJB_05490 LHKJJB_05490 100.0 Morganella morganii S3 - Hemolysin
HKOGLL_05425 HKOGLL_05425 100.0 Morganella morganii S5 - Hemolysin
HKOGLL_05455 HKOGLL_05455 39.3 Morganella morganii S5 - Filamentous hemagglutinin
F4V73_RS03085 F4V73_RS03085 42.7 Morganella psychrotolerans - filamentous hemagglutinin N-terminal domain-containing protein
F4V73_RS03115 F4V73_RS03115 67.8 Morganella psychrotolerans - filamentous hemagglutinin N-terminal domain-containing protein
F4V73_RS03135 F4V73_RS03135 39.3 Morganella psychrotolerans - filamentous hemagglutinin N-terminal domain-containing protein
F4V73_RS03150 F4V73_RS03150 39.9 Morganella psychrotolerans - filamentous hemagglutinin N-terminal domain-containing protein
PMI_RS14040 PMI_RS14040 27.1 Proteus mirabilis HI4320 - filamentous hemagglutinin N-terminal domain-containing protein

Distribution of the homologs in the orthogroup group_21

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_21

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0DSI1 3.8e-18 84 38 1 121 1 cdiA tRNA nuclease CdiA Escherichia coli (strain NC101)
D5CBA0 1.06e-17 83 36 1 119 1 cdiA 16S rRNA endonuclease CdiA Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCTC 10005 / WDCM 00083 / NCDC 279-56)
B3BM48 2.47e-17 82 38 1 121 1 cdiA1 tRNA nuclease CdiA Escherichia coli O157:H7 (strain EC869)
A0A1S4NYE3 2.88e-17 82 38 1 121 1 cdiA tRNA nuclease CdiA Escherichia coli (strain STEC_O31)
Q0T963 3.33e-17 82 38 1 121 1 cdiA tRNA nuclease CdiA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q3YL96 1.67e-16 80 37 1 121 1 cdiA Toxin CdiA Escherichia coli
C4SGN7 5.09e-13 70 32 2 116 3 cdiA tRNA nuclease CdiA Yersinia mollaretii (strain ATCC 43969 / DSM 18520 / CIP 103324 / CNY 7263 / WAIP 204)
P15320 1.13e-11 65 32 1 134 1 shlA Hemolysin Serratia marcescens
P16466 3.18e-11 64 37 1 108 1 hpmA Hemolysin Proteus mirabilis
P12255 1.19e-07 54 29 1 116 1 fhaB Filamentous hemagglutinin Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
Q7CGD9 3.26e-07 53 26 3 158 3 cdiA Toxin CdiA Yersinia pestis
Q06277 0.000351 44 27 1 101 1 ibpA Protein adenylyltransferase and cysteine protease IbpA Histophilus somni (strain 2336)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_08775
Feature type CDS
Gene -
Product Hemolysin
Location 163720 - 164277 (strand: -1)
Length 558 (nucleotides) / 185 (amino acids)
In genomic island -

Contig

Accession ZDB_523
Length 257158 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_21
Orthogroup size 15
N. genomes 7

Actions

Genomic region

Domains

PF05860 TPS secretion domain

Protein Sequence

MKKTLTALSFISVALFSAAVAAGPGSTEYTYRNGDKIRVASPEAETSLFKDKSGKPVLVITSPDNRGISHNIFTDYNVGKKGLVIHNKENANTIINEVIGDNKTHLRGNTFVAGGKASLVIVNPNGVICQDCSSTNTSLYSHRETLPVVINAAKNNEVIFDARKPLHASERLTGISHNISVNSPR

Flanking regions ( +/- flanking 50bp)

AAAGTTCGTTTGGTTATTTACACTTAATATAATGATTAAAGGAATAAATCATGAAAAAAACATTAACGGCGTTATCATTCATTTCCGTTGCATTATTCTCTGCTGCTGTTGCCGCCGGACCGGGAAGCACAGAATATACCTACCGTAACGGCGATAAAATCCGGGTAGCCAGTCCGGAAGCGGAAACATCGCTGTTTAAAGATAAATCAGGGAAACCGGTTTTGGTGATTACATCACCGGATAACCGCGGGATCTCGCATAATATTTTTACTGACTATAATGTCGGCAAGAAAGGCCTCGTCATTCATAATAAAGAAAATGCCAACACCATTATTAATGAAGTGATCGGCGACAATAAAACCCACCTGCGCGGTAATACCTTTGTCGCCGGCGGCAAGGCCAGTCTGGTGATTGTTAACCCGAATGGTGTGATCTGTCAGGATTGCAGCTCAACCAATACCTCACTCTATTCTCACCGCGAAACACTGCCGGTGGTTATCAATGCTGCAAAAAATAATGAGGTCATTTTTGATGCCCGCAAACCGCTGCATGCATCAGAACGTCTGACCGGCATCAGTCATAATATTTCCGTAAATTCACCGCGCTGACCCCCTGTTATACCGCCGTTTTCACGGCGGTATTGCTTTTATCAGAAACT