Homologs in group_1837

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13615 FBDBKF_13615 60.6 Morganella morganii S1 - Filamentous hemagglutinin
EHELCC_08480 EHELCC_08480 60.6 Morganella morganii S2 - Filamentous hemagglutinin
NLDBIP_08805 NLDBIP_08805 60.6 Morganella morganii S4 - Filamentous hemagglutinin
LHKJJB_05460 LHKJJB_05460 60.6 Morganella morganii S3 - Filamentous hemagglutinin
HKOGLL_05455 HKOGLL_05455 60.6 Morganella morganii S5 - Filamentous hemagglutinin
F4V73_RS03135 F4V73_RS03135 54.0 Morganella psychrotolerans - filamentous hemagglutinin N-terminal domain-containing protein

Distribution of the homologs in the orthogroup group_1837

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1837

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B3BM48 1.36e-19 95 34 5 191 1 cdiA1 tRNA nuclease CdiA Escherichia coli O157:H7 (strain EC869)
Q0T963 1.64e-19 95 34 5 191 1 cdiA tRNA nuclease CdiA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P0DSI1 4.54e-19 94 34 5 191 1 cdiA tRNA nuclease CdiA Escherichia coli (strain NC101)
Q3YL96 5.91e-19 94 34 5 191 1 cdiA Toxin CdiA Escherichia coli
D5CBA0 1.63e-18 92 40 2 138 1 cdiA 16S rRNA endonuclease CdiA Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCTC 10005 / WDCM 00083 / NCDC 279-56)
A0A1S4NYE3 2.09e-18 92 33 5 191 1 cdiA tRNA nuclease CdiA Escherichia coli (strain STEC_O31)
C4SGN7 5.72e-16 84 31 4 187 3 cdiA tRNA nuclease CdiA Yersinia mollaretii (strain ATCC 43969 / DSM 18520 / CIP 103324 / CNY 7263 / WAIP 204)
P16466 2.66e-15 82 37 4 150 1 hpmA Hemolysin Proteus mirabilis
P15320 8.45e-15 80 38 2 120 1 shlA Hemolysin Serratia marcescens
Q7CGD9 9.31e-14 77 34 4 141 3 cdiA Toxin CdiA Yersinia pestis
P12255 1.14e-11 70 37 2 127 1 fhaB Filamentous hemagglutinin Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
I1WVY3 9.13e-11 68 31 4 169 1 cdiA2 tRNA nuclease CdiA-2 Burkholderia pseudomallei (strain 1026b)
Q06277 3.28e-07 57 33 3 109 1 ibpA Protein adenylyltransferase and cysteine protease IbpA Histophilus somni (strain 2336)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS03150
Feature type CDS
Gene -
Product filamentous hemagglutinin N-terminal domain-containing protein
Location 672353 - 673681 (strand: -1)
Length 1329 (nucleotides) / 442 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1837
Orthogroup size 7
N. genomes 6

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Genomic region

Domains

PF05860 TPS secretion domain

Protein Sequence

MKLTKIATALLFLAPAYLSAATQDFTYRNGYKITVDQTSPDVSIQIKNNKPTQSISTPNSNGISHNYFSEFNVGKRGLNIDNAPSARVIINEVTGSNISHLDGKMAVMGKQASLIIANPNGINCNNCGVSNVSHLTLLAGNTAPDVATGKLTGFKNISGDVLVNNVKSKDIQSNLTITAVSADIRNAYIDAPMTTLNIGAEKIDFSDKITSQIAEQKLDRGHLINEAKTYSASGIDEDTKIKGNLTVNATNSSFSNDGVITGNTVNLNLLHSEFMNDGYIKASTINVNAKGGSISNSNTLFAKQLSGTYNGDFSLSNNVAMAGKSTFSVGTLTLTSNNINNLIDLNNSEYQGVYRDNTLTIDNESSFYVSSFNINGSHDTINIKNKKIMGAGLVNINGGSVRLHNEDLLAVKAGSTVHGILGTFGNGINHENITATTHDFNM

Flanking regions ( +/- flanking 50bp)

GTATTGTCTCCCGGCTGACAATGATGTCATTATGTTAAAAGGGATATTTAATGAAGTTAACCAAAATTGCCACTGCATTATTATTTTTAGCGCCCGCTTATTTATCTGCGGCAACCCAGGATTTTACCTACCGTAATGGTTATAAAATCACAGTTGATCAGACCTCACCTGACGTCAGTATTCAAATAAAAAATAATAAACCGACACAATCAATCAGCACACCAAATTCAAATGGTATTTCGCATAACTATTTTTCTGAATTCAATGTGGGAAAACGCGGACTGAACATTGATAACGCACCATCTGCCCGGGTGATTATCAACGAAGTAACCGGATCAAATATCAGTCACCTTGACGGCAAAATGGCCGTTATGGGTAAACAAGCCAGCCTGATTATCGCTAACCCTAATGGTATTAACTGCAACAATTGTGGTGTATCCAATGTCAGCCACCTGACACTTTTAGCCGGAAATACGGCGCCTGATGTTGCGACCGGGAAATTAACCGGTTTTAAAAATATATCAGGTGATGTTTTAGTTAATAATGTAAAAAGTAAAGACATCCAAAGTAATTTAACCATTACAGCCGTCAGTGCTGACATCAGAAACGCTTATATTGATGCGCCAATGACAACACTTAATATTGGTGCCGAAAAAATTGATTTTTCTGATAAAATCACATCGCAAATTGCCGAACAAAAACTCGACCGGGGACATCTGATTAATGAAGCAAAAACCTATTCAGCATCCGGAATTGATGAAGATACAAAAATAAAAGGCAATCTTACTGTTAATGCAACAAATTCGTCTTTTTCTAATGATGGGGTGATCACCGGCAATACAGTGAACTTAAATTTATTACACTCTGAATTTATGAATGATGGATATATAAAAGCAAGCACAATTAATGTAAATGCTAAAGGTGGTAGTATTTCCAATAGCAATACATTGTTTGCGAAACAATTATCCGGAACATACAATGGTGATTTTTCTTTATCCAACAACGTTGCTATGGCTGGTAAAAGTACGTTCAGTGTCGGTACTCTGACACTGACAAGTAATAATATTAACAACCTGATTGACCTTAATAATAGTGAGTACCAGGGCGTTTATCGTGATAATACACTCACAATTGATAATGAATCTTCTTTCTATGTTAGTTCATTCAATATCAATGGAAGTCACGATACCATTAATATTAAAAACAAAAAAATAATGGGGGCTGGCCTTGTTAATATAAACGGCGGTTCTGTCAGACTCCATAATGAAGATCTATTAGCGGTTAAGGCCGGTTCAACTGTTCATGGTATTCTTGGCACCTTTGGCAACGGCATTAATCATGAGAATATTACCGCGACCACTCATGATTTTAATATGTAAATCTGATTAAATAAAAGGTGATGTTTTAATAAAAACATCACCTTTTAAAT