Orthogroup:group_21


Homologs in group_21

Help

19 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08075 FBDBKF_08075 Morganella morganii S1 dmsB DMSO/selenate family reductase complex B subunit
FBDBKF_10455 FBDBKF_10455 Morganella morganii S1 dmsB DMSO/selenate family reductase complex B subunit
EHELCC_13905 EHELCC_13905 Morganella morganii S2 dmsB DMSO/selenate family reductase complex B subunit
EHELCC_14790 EHELCC_14790 Morganella morganii S2 dmsB DMSO/selenate family reductase complex B subunit
NLDBIP_14350 NLDBIP_14350 Morganella morganii S4 dmsB DMSO/selenate family reductase complex B subunit
NLDBIP_14620 NLDBIP_14620 Morganella morganii S4 dmsB DMSO/selenate family reductase complex B subunit
LHKJJB_08500 LHKJJB_08500 Morganella morganii S3 dmsB DMSO/selenate family reductase complex B subunit
LHKJJB_14725 LHKJJB_14725 Morganella morganii S3 dmsB DMSO/selenate family reductase complex B subunit
HKOGLL_08050 HKOGLL_08050 Morganella morganii S5 dmsB DMSO/selenate family reductase complex B subunit
HKOGLL_13345 HKOGLL_13345 Morganella morganii S5 dmsB DMSO/selenate family reductase complex B subunit
F4V73_RS05065 F4V73_RS05065 Morganella psychrotolerans - DMSO/selenate family reductase complex B subunit
F4V73_RS12920 F4V73_RS12920 Morganella psychrotolerans - DMSO/selenate family reductase complex B subunit
F4V73_RS14155 F4V73_RS14155 Morganella psychrotolerans - DMSO/selenate family reductase complex B subunit
PMI_RS00325 PMI_RS00325 Proteus mirabilis HI4320 - 4Fe-4S dicluster domain-containing protein
PMI_RS00340 PMI_RS00340 Proteus mirabilis HI4320 - ferredoxin-like protein
PMI_RS00820 PMI_RS00820 Proteus mirabilis HI4320 - 4Fe-4S dicluster domain-containing protein
PMI_RS05815 PMI_RS05815 Proteus mirabilis HI4320 dmsB dimethylsulfoxide reductase subunit B
PMI_RS08350 PMI_RS08350 Proteus mirabilis HI4320 dmsB dimethylsulfoxide reductase subunit B
PMI_RS14660 PMI_RS14660 Proteus mirabilis HI4320 dmsB dimethylsulfoxide reductase subunit B

Distribution of group_21 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_21 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_21

Orthogroup content: 19 members

Help

This page summarizes the annotation of all members of the orthologous group group_21.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dmsB 13
2 - 6

Product

# Product Occurence
1 DMSO/selenate family reductase complex B subunit 13
2 4Fe-4S dicluster domain-containing protein 2
3 ferredoxin-like protein 1
4 dimethylsulfoxide reductase subunit B 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0437 19 C Energy production and conversion (C) Fe-S-cluster-containing dehydrogenase component (DMSO reductase)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K04014 1 protein NrfC - -
K07307 17 anaerobic dimethyl sulfoxide reductase subunit B Sulfur metabolism
Metabolic pathways		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF12797 6 4Fe-4S binding domain
PF12800 8 4Fe-4S binding domain
PF13247 19 4Fe-4S dicluster domain

Annotations of the 298 SwissProt hits

Annotation Number of occurrences
Anaerobic dimethyl sulfoxide reductase chain B 3
Arsenate respiratory reductase iron-sulfur subunit ArrB 1
Chlorate reductase subunit beta 1
CoB--CoM heterodisulfide reductase iron-sulfur subunit A 1
CoB--CoM heterodisulfide reductase iron-sulfur subunit A 1 1
Dimethylsulfide dehydrogenase subunit beta 1
Electron transport protein HydN 3
Ferredoxin 10
Ferredoxin 7Fe 1
Ferredoxin-1 2
Ferredoxin-1 (Fragment) 1
Formate dehydrogenase 2 subunit beta (cytochrome c-553) 1
Formate dehydrogenase iron-sulfur subunit 2
Formate dehydrogenase subunit beta 1
Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit 2
Formate dehydrogenase-O iron-sulfur subunit 3
Formate hydrogenlyase subunit 2 3
Formate hydrogenlyase subunit 6 1
Frd operon probable iron-sulfur subunit A (Fragment) 1
H(2)/formate:CoB-CoM heterodisulfide,ferredoxin reductase subunit A 1
Hdr-like menaquinol oxidoreductase iron-sulfur subunit 1 1
Hydrogenase-2 operon protein HybA 3
Hydrogenase-4 component A 1
Iron-sulfur protein 1
Ketoisovalerate oxidoreductase subunit VorD 3
Menaquinone reductase, iron-sulfur cluster-binding subunit 1
Methylamine utilization ferredoxin-type protein MauM 1
NAD(P)H-quinone oxidoreductase subunit I 22
NAD(P)H-quinone oxidoreductase subunit I, chloroplastic 173
NADH-dependent phenylglyoxylate dehydrogenase subunit beta 1
NADH-quinone oxidoreductase subunit I 6
Nitrate reductase beta chain 1
Perchlorate reductase subunit beta 1
Polyferredoxin protein FwdF 1
Polyferredoxin protein MvhB 2
Polyferredoxin protein VhuB 2
Polysulfide reductase chain B 1
Probable anaerobic dimethyl sulfoxide reductase chain YnfG 2
Probable ferredoxin TA0517 1
Protein DVU_0535 1
Protein NrfC 3
Protein NrfC homolog 1
Putative dimethyl sulfoxide reductase iron-sulfur subunit B 1
Putative electron transport protein YgfS 1
Putative electron transport protein YsaA 1
Putative oxidoreductase AegA 1
Putative oxidoreductase UacF 1
Pyrogallol hydroxytransferase small subunit 1
Respiratory nitrate reductase 1 beta chain 2
Respiratory nitrate reductase 2 beta chain 1
Respiratory nitrate reductase beta chain (Fragments) 1
Respiratory nitrate reductase subunit beta 1
Selenate reductase subunit beta 1
Sulfite dehydrogenase subunit B 1
Tetrathionate reductase subunit B 2
Thiosulfate reductase electron transfer subunit PhsB 2
Uncharacterized ferredoxin MJ0155 1
Uncharacterized ferredoxin MJ0199 1
Uncharacterized ferredoxin MJ0265 1
Uncharacterized ferredoxin-like protein YdhX 2
Uncharacterized ferredoxin-like protein YdhY 3
Uncharacterized polyferredoxin-like protein MJ0514 1
Uncharacterized polyferredoxin-like protein MJ1303 1
Uncharacterized protein MJ0264 1
Uncharacterized protein MTH_1684 1

Protein length

Min length 183
Max length 223
Mean length (sd) 208.4 (7.8)
Median length 209.0

Protein length distribution