PF04879

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF04879
Protein list: lists the 51 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF04879
Description Molybdopterin oxidoreductase Fe4S4 domain

Occurence in the database

PF04879 is associated with 51 different proteins
The 51 proteins are classified into 8 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_435 FBDBKF_03650 133050 134981 -1 fdhF formate dehydrogenase subunit alpha Morganella morganii S1
1 group_209 FBDBKF_07405 163964 166132 1 fdhF formate dehydrogenase subunit alpha Morganella morganii S1
2 group_63 FBDBKF_08060 147834 150881 -1 fdnG formate dehydrogenase-N subunit alpha Morganella morganii S1
3 group_204 FBDBKF_08070 152327 154747 1 bisC Anaerobic selenocysteine-containing dehydrogenase Morganella morganii S1
4 group_427 FBDBKF_10450 45874 48327 1 dmsA dimethylsulfoxide reductase subunit A Morganella morganii S1
5 group_1932 FBDBKF_14140 21938 24670 -1 nuoG NADH-quinone oxidoreductase subunit NuoG Morganella morganii S1
6 group_63 FBDBKF_16120 12659 15706 1 fdnG formate dehydrogenase-N subunit alpha Morganella morganii S1
7 group_209 EHELCC_03565 20054 22222 -1 fdhF formate dehydrogenase subunit alpha Morganella morganii S2
8 group_435 EHELCC_06885 112122 114053 1 fdhF formate dehydrogenase subunit alpha Morganella morganii S2
9 group_1932 EHELCC_08140 92315 95047 1 nuoG NADH-quinone oxidoreductase subunit NuoG Morganella morganii S2
10 group_63 EHELCC_13890 122028 125075 -1 fdnG formate dehydrogenase-N subunit alpha Morganella morganii S2
11 group_204 EHELCC_13900 126521 128941 1 bisC Anaerobic selenocysteine-containing dehydrogenase Morganella morganii S2
12 group_427 EHELCC_14785 45864 48317 1 dmsA dimethylsulfoxide reductase subunit A Morganella morganii S2
13 group_63 EHELCC_16155 12659 15706 1 fdnG formate dehydrogenase-N subunit alpha Morganella morganii S2
14 group_209 NLDBIP_03565 19850 22018 -1 fdhF formate dehydrogenase subunit alpha Morganella morganii S4
15 group_435 NLDBIP_07210 111995 113926 1 fdhF formate dehydrogenase subunit alpha Morganella morganii S4
16 group_1932 NLDBIP_08465 92315 95047 1 nuoG NADH-quinone oxidoreductase subunit NuoG Morganella morganii S4
17 group_63 NLDBIP_14335 142903 145950 -1 fdnG formate dehydrogenase-N subunit alpha Morganella morganii S4
18 group_204 NLDBIP_14345 147396 149816 1 bisC Anaerobic selenocysteine-containing dehydrogenase Morganella morganii S4
19 group_427 NLDBIP_14615 45864 48317 1 dmsA dimethylsulfoxide reductase subunit A Morganella morganii S4
20 group_63 NLDBIP_17185 46464 49511 -1 fdnG formate dehydrogenase-N subunit alpha Morganella morganii S4
21 group_1932 LHKJJB_05800 162112 164844 -1 nuoG NADH-quinone oxidoreductase subunit NuoG Morganella morganii S3
22 group_435 LHKJJB_06745 75741 77672 1 fdhF formate dehydrogenase subunit alpha Morganella morganii S3
23 group_204 LHKJJB_08505 9933 12353 -1 bisC Anaerobic selenocysteine-containing dehydrogenase Morganella morganii S3
24 group_63 LHKJJB_08515 13799 16846 1 fdnG formate dehydrogenase-N subunit alpha Morganella morganii S3
25 group_209 LHKJJB_09395 19964 22132 -1 fdhF formate dehydrogenase subunit alpha Morganella morganii S3
26 group_427 LHKJJB_14730 93409 95862 -1 dmsA dimethylsulfoxide reductase subunit A Morganella morganii S3
27 group_63 LHKJJB_17105 49566 52613 -1 fdnG formate dehydrogenase-N subunit alpha Morganella morganii S3
28 group_435 HKOGLL_04185 155715 157646 -1 fdhF formate dehydrogenase subunit alpha Morganella morganii S5
29 group_1932 HKOGLL_05115 76906 79638 1 nuoG NADH-quinone oxidoreductase subunit NuoG Morganella morganii S5
30 group_204 HKOGLL_08055 9933 12353 -1 bisC Anaerobic selenocysteine-containing dehydrogenase Morganella morganii S5
31 group_63 HKOGLL_08065 13799 16846 1 fdnG formate dehydrogenase-N subunit alpha Morganella morganii S5
32 group_209 HKOGLL_09580 168920 171088 1 fdhF formate dehydrogenase subunit alpha Morganella morganii S5
33 group_427 HKOGLL_13350 93409 95862 -1 dmsA dimethylsulfoxide reductase subunit A Morganella morganii S5
34 group_63 HKOGLL_16735 12659 15706 1 fdnG formate dehydrogenase-N subunit alpha Morganella morganii S5
35 group_1932 F4V73_RS02795 589704 592427 1 nuoG NADH-quinone oxidoreductase subunit NuoG Morganella psychrotolerans
36 group_3734 F4V73_RS05070 1078926 1081325 -1 DMSO/selenate family reductase complex A subunit Morganella psychrotolerans
37 group_209 F4V73_RS08500 1754658 1756823 -1 fdhF formate dehydrogenase subunit alpha Morganella psychrotolerans
38 group_435 F4V73_RS11220 383637 385790 1 fdhF formate dehydrogenase subunit alpha Morganella psychrotolerans
39 group_204 F4V73_RS12925 190988 193408 -1 DMSO/selenate family reductase complex A subunit Morganella psychrotolerans
40 group_63 F4V73_RS12935 194972 198019 1 fdnG formate dehydrogenase-N subunit alpha Morganella psychrotolerans
41 group_427 F4V73_RS14150 44180 46627 1 dmsA dimethylsulfoxide reductase subunit A Morganella psychrotolerans
42 group_63 F4V73_RS17495 130494 133541 -1 fdnG formate dehydrogenase-N subunit alpha Morganella psychrotolerans
43 group_3734 PMI_RS05810 1270635 1273031 1 molybdopterin-dependent oxidoreductase Proteus mirabilis HI4320
44 group_427 PMI_RS08345 1822787 1825225 1 molybdopterin-dependent oxidoreductase Proteus mirabilis HI4320
45 group_1932 PMI_RS08620 1880929 1883652 -1 nuoG NADH-quinone oxidoreductase subunit NuoG Proteus mirabilis HI4320
46 group_3733 PMI_RS08900 1947407 1949686 1 phsA thiosulfate reductase PhsA Proteus mirabilis HI4320
47 group_204 PMI_RS14655 3247200 3249617 1 molybdopterin-dependent oxidoreductase Proteus mirabilis HI4320
48 group_209 PMI_RS14730 3265604 3267772 -1 fdhF formate dehydrogenase subunit alpha Proteus mirabilis HI4320
49 group_63 PMI_RS15395 3420023 3423070 -1 fdnG formate dehydrogenase-N subunit alpha Proteus mirabilis HI4320
50 group_435 PMI_RS17800 3909884 3912028 1 fdhF formate dehydrogenase subunit alpha Proteus mirabilis HI4320