Orthogroup:group_435


Homologs in group_435

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00390 FBDBKF_00390 Morganella morganii S1 gyrA DNA topoisomerase (ATP-hydrolyzing) subunit A
EHELCC_01155 EHELCC_01155 Morganella morganii S2 gyrA DNA topoisomerase (ATP-hydrolyzing) subunit A
NLDBIP_02305 NLDBIP_02305 Morganella morganii S4 gyrA DNA topoisomerase (ATP-hydrolyzing) subunit A
LHKJJB_03820 LHKJJB_03820 Morganella morganii S3 gyrA DNA topoisomerase (ATP-hydrolyzing) subunit A
HKOGLL_03225 HKOGLL_03225 Morganella morganii S5 gyrA DNA topoisomerase (ATP-hydrolyzing) subunit A
F4V73_RS06370 F4V73_RS06370 Morganella psychrotolerans gyrA DNA topoisomerase (ATP-hydrolyzing) subunit A
PMI_RS08500 PMI_RS08500 Proteus mirabilis HI4320 gyrA DNA topoisomerase (ATP-hydrolyzing) subunit A

Distribution of group_435 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_435 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_435

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_435.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 gyrA 7

Product

# Product Occurence
1 DNA topoisomerase (ATP-hydrolyzing) subunit A 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0188 7 L Replication, recombination and repair (L) DNA gyrase/topoisomerase IV, subunit A

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02469 7 DNA gyrase subunit A [EC:5.6.2.2] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00521 7 DNA gyrase/topoisomerase IV, subunit A
PF03989 7 DNA gyrase C-terminal domain, beta-propeller

Annotations of the 159 SwissProt hits

Annotation Number of occurrences
DNA gyrase subunit A 76
DNA gyrase subunit A (Fragment) 7
DNA gyrase subunit A, chloroplastic/mitochondrial 2
DNA topoisomerase 2 19
DNA topoisomerase 2 top-2 1
DNA topoisomerase 2, mitochondrial 1
DNA topoisomerase 2-alpha 6
DNA topoisomerase 2-beta 4
DNA topoisomerase 4 subunit A 35
DNA topoisomerase 4 subunit A (Fragment) 1
DNA topoisomerase medium subunit 1
DNA topoisomerase-like protein cin-4 1
Probable DNA gyrase subunit A, chloroplastic/mitochondrial 1
Probable DNA topoisomerase 2 1
Putative DNA topoisomerase 2, mitochondrial 1
Topoisomerase subunit TopoM 1
Type 2 topoisomerase subunit A 1

Protein length

Min length 871
Max length 877
Mean length (sd) 872.6 (2.7)
Median length 871.0

Protein length distribution