PF03061


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03061, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 22 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03061
Description Thioesterase superfamily

Occurence in the database

PF03061 is associated with 22 different proteins (see tab "Protein list" and "Profile")
The 22 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_267 FBDBKF_05225 52613 53053 1 yciA acyl-CoA thioester hydrolase YciA Morganella morganii S1
1 group_1035 FBDBKF_05835 169657 170082 -1 paaI Acyl-CoA thioesterase PaaI, contains HGG motif Morganella morganii S1
2 group_325 FBDBKF_09760 47694 48086 -1 ybgC tol-pal system-associated acyl-CoA thioesterase Morganella morganii S1
3 group_325 EHELCC_04560 239659 240051 -1 ybgC tol-pal system-associated acyl-CoA thioesterase Morganella morganii S2
4 group_1035 EHELCC_11755 11412 11837 1 paaI Acyl-CoA thioesterase PaaI, contains HGG motif Morganella morganii S2
5 group_267 EHELCC_12365 128441 128881 -1 yciA acyl-CoA thioester hydrolase YciA Morganella morganii S2
6 group_325 NLDBIP_04560 239455 239847 -1 ybgC tol-pal system-associated acyl-CoA thioesterase Morganella morganii S4
7 group_1035 NLDBIP_12095 11367 11792 1 paaI Acyl-CoA thioesterase PaaI, contains HGG motif Morganella morganii S4
8 group_267 NLDBIP_12705 128396 128836 -1 yciA acyl-CoA thioester hydrolase YciA Morganella morganii S4
9 group_1035 LHKJJB_11955 11412 11837 1 paaI Acyl-CoA thioesterase PaaI, contains HGG motif Morganella morganii S3
10 group_267 LHKJJB_12565 128441 128881 -1 yciA acyl-CoA thioester hydrolase YciA Morganella morganii S3
11 group_325 LHKJJB_14070 95531 95923 1 ybgC tol-pal system-associated acyl-CoA thioesterase Morganella morganii S3
12 group_1035 HKOGLL_10570 11412 11837 1 paaI Acyl-CoA thioesterase PaaI, contains HGG motif Morganella morganii S5
13 group_267 HKOGLL_11180 128441 128881 -1 yciA acyl-CoA thioester hydrolase YciA Morganella morganii S5
14 group_325 HKOGLL_12465 48475 48867 -1 ybgC tol-pal system-associated acyl-CoA thioesterase Morganella morganii S5
15 group_325 F4V73_RS00580 124528 124920 1 ybgC tol-pal system-associated acyl-CoA thioesterase Morganella psychrotolerans
16 group_1035 F4V73_RS03490 747160 747585 1 hotdog fold thioesterase Morganella psychrotolerans
17 group_267 F4V73_RS05685 1208956 1209390 1 yciA acyl-CoA thioester hydrolase YciA Morganella psychrotolerans
18 group_267 PMI_RS06535 1434183 1434614 1 yciA acyl-CoA thioester hydrolase YciA Proteus mirabilis HI4320
19 group_1035 PMI_RS06860 1496941 1497354 -1 hotdog fold thioesterase Proteus mirabilis HI4320
20 group_267 PMI_RS08275 1808776 1809198 1 acyl-CoA thioesterase Proteus mirabilis HI4320
21 group_4694 PMI_RS16630 3665550 3666017 -1 thioesterase family protein Proteus mirabilis HI4320