PF03061
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03061, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains
within the database. 22 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.
Description
External link |
PF03061 |
Description |
Thioesterase superfamily |
Occurence in the database
PF03061 is associated with 22 different proteins (see tab "Protein list" and "Profile") |
The 22 proteins are classified into 4 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_267 |
FBDBKF_05225 |
52613 |
53053 |
1 |
yciA |
acyl-CoA thioester hydrolase YciA |
Morganella morganii S1 |
1 |
group_1035 |
FBDBKF_05835 |
169657 |
170082 |
-1 |
paaI |
Acyl-CoA thioesterase PaaI, contains HGG motif |
Morganella morganii S1 |
2 |
group_325 |
FBDBKF_09760 |
47694 |
48086 |
-1 |
ybgC |
tol-pal system-associated acyl-CoA thioesterase |
Morganella morganii S1 |
3 |
group_325 |
EHELCC_04560 |
239659 |
240051 |
-1 |
ybgC |
tol-pal system-associated acyl-CoA thioesterase |
Morganella morganii S2 |
4 |
group_1035 |
EHELCC_11755 |
11412 |
11837 |
1 |
paaI |
Acyl-CoA thioesterase PaaI, contains HGG motif |
Morganella morganii S2 |
5 |
group_267 |
EHELCC_12365 |
128441 |
128881 |
-1 |
yciA |
acyl-CoA thioester hydrolase YciA |
Morganella morganii S2 |
6 |
group_325 |
NLDBIP_04560 |
239455 |
239847 |
-1 |
ybgC |
tol-pal system-associated acyl-CoA thioesterase |
Morganella morganii S4 |
7 |
group_1035 |
NLDBIP_12095 |
11367 |
11792 |
1 |
paaI |
Acyl-CoA thioesterase PaaI, contains HGG motif |
Morganella morganii S4 |
8 |
group_267 |
NLDBIP_12705 |
128396 |
128836 |
-1 |
yciA |
acyl-CoA thioester hydrolase YciA |
Morganella morganii S4 |
9 |
group_1035 |
LHKJJB_11955 |
11412 |
11837 |
1 |
paaI |
Acyl-CoA thioesterase PaaI, contains HGG motif |
Morganella morganii S3 |
10 |
group_267 |
LHKJJB_12565 |
128441 |
128881 |
-1 |
yciA |
acyl-CoA thioester hydrolase YciA |
Morganella morganii S3 |
11 |
group_325 |
LHKJJB_14070 |
95531 |
95923 |
1 |
ybgC |
tol-pal system-associated acyl-CoA thioesterase |
Morganella morganii S3 |
12 |
group_1035 |
HKOGLL_10570 |
11412 |
11837 |
1 |
paaI |
Acyl-CoA thioesterase PaaI, contains HGG motif |
Morganella morganii S5 |
13 |
group_267 |
HKOGLL_11180 |
128441 |
128881 |
-1 |
yciA |
acyl-CoA thioester hydrolase YciA |
Morganella morganii S5 |
14 |
group_325 |
HKOGLL_12465 |
48475 |
48867 |
-1 |
ybgC |
tol-pal system-associated acyl-CoA thioesterase |
Morganella morganii S5 |
15 |
group_325 |
F4V73_RS00580 |
124528 |
124920 |
1 |
ybgC |
tol-pal system-associated acyl-CoA thioesterase |
Morganella psychrotolerans |
16 |
group_1035 |
F4V73_RS03490 |
747160 |
747585 |
1 |
|
hotdog fold thioesterase |
Morganella psychrotolerans |
17 |
group_267 |
F4V73_RS05685 |
1208956 |
1209390 |
1 |
yciA |
acyl-CoA thioester hydrolase YciA |
Morganella psychrotolerans |
18 |
group_267 |
PMI_RS06535 |
1434183 |
1434614 |
1 |
yciA |
acyl-CoA thioester hydrolase YciA |
Proteus mirabilis HI4320 |
19 |
group_1035 |
PMI_RS06860 |
1496941 |
1497354 |
-1 |
|
hotdog fold thioesterase |
Proteus mirabilis HI4320 |
20 |
group_267 |
PMI_RS08275 |
1808776 |
1809198 |
1 |
|
acyl-CoA thioesterase |
Proteus mirabilis HI4320 |
21 |
group_4694 |
PMI_RS16630 |
3665550 |
3666017 |
-1 |
|
thioesterase family protein |
Proteus mirabilis HI4320 |