Homologs in group_4694

Help

0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4694

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_4694

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ADP4 4.96e-72 216 63 0 155 3 yigI Medium/long-chain acyl-CoA thioesterase YigI Shigella flexneri
P0ADP2 4.96e-72 216 63 0 155 1 yigI Medium/long-chain acyl-CoA thioesterase YigI Escherichia coli (strain K12)
P0ADP3 4.96e-72 216 63 0 155 3 yigI Medium/long-chain acyl-CoA thioesterase YigI Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A1U0 2.01e-70 212 63 0 155 3 yigI Medium/long-chain acyl-CoA thioesterase YigI Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1U1 2.01e-70 212 63 0 155 3 yigI Medium/long-chain acyl-CoA thioesterase YigI Salmonella typhi
P20378 2.07e-06 48 32 5 97 3 VNG_1336C Putative esterase VNG_1336C Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
Q97YR6 1.82e-05 45 24 5 133 3 SSO1253 Putative esterase SSO1253 Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
P95914 0.000116 43 24 4 116 3 SSO2140 Putative esterase SSO2140 Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS16630
Feature type CDS
Gene -
Product thioesterase family protein
Location 3665550 - 3666017 (strand: -1)
Length 468 (nucleotides) / 155 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4694
Orthogroup size 1
N. genomes 1

Actions

Genomic region

Domains

PF03061 Thioesterase superfamily

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2050 Secondary metabolites biosynthesis, transport and catabolism (Q) Q Acyl-CoA thioesterase PaaI, contains HGG motif

Protein Sequence

MEKILTLEEAQVLIGHVFVYQMPFNQLIGLELIRFEQDYAEIQFRYQDKLVGNIAQRILHGGMIASVLDVSAGLVCVGNALTRLAPISQEQLEQKLAKMGTIDLRVDYLRPGRGECFTASSHILRSGNKVSVARVELHNEKQVHIASGTATYIVG

Flanking regions ( +/- flanking 50bp)

TATTATTAACAAAGCATTAACCTAATAATAAAATGTCGAGGAACTTTAAAATGGAGAAAATATTAACACTGGAAGAAGCACAAGTGTTGATTGGACATGTTTTTGTCTATCAAATGCCTTTTAATCAACTGATAGGTTTAGAATTAATTCGCTTCGAACAAGATTATGCTGAGATCCAATTTCGCTACCAAGACAAACTGGTTGGCAATATCGCACAACGCATTTTACATGGTGGCATGATAGCCTCGGTGTTAGACGTAAGTGCAGGTTTAGTCTGTGTAGGTAATGCCCTAACACGTCTAGCCCCTATATCCCAAGAGCAACTCGAACAAAAACTGGCCAAAATGGGCACTATCGATCTACGTGTTGATTATTTACGCCCAGGGCGAGGGGAATGTTTTACCGCAAGTAGTCATATACTACGTAGTGGTAATAAAGTTTCTGTGGCAAGGGTTGAATTACACAATGAAAAACAAGTTCATATCGCCAGCGGCACAGCAACTTATATTGTTGGCTGATGCGACTTATCCATTATCTTGGGTAGATTAATATTAATTACTTGTAAAAA