PF02775


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF02775, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 53 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF02775
Description Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

Occurence in the database

PF02775 is associated with 53 different proteins (see tab "Protein list" and "Profile")
The 53 proteins are classified into 6 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_8 FBDBKF_04395 68817 70538 -1 ilvI acetolactate synthase 3 large subunit Morganella morganii S1
1 group_262 FBDBKF_04725 147679 149328 1 pDC1 TPP-dependent 2-oxoacid decarboxylase, includes indolepyruvate decarboxylase Morganella morganii S1
2 group_8 FBDBKF_08160 5350 7008 1 ilvG acetolactate synthase 2 catalytic subunit Morganella morganii S1
3 group_1616 FBDBKF_10660 98614 100335 1 poxB ubiquinone-dependent pyruvate dehydrogenase Morganella morganii S1
4 group_2908 FBDBKF_13540 84900 86528 -1 mdlC benzoylformate decarboxylase Morganella morganii S1
5 group_1884 FBDBKF_14085 9159 10829 -1 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase Morganella morganii S1
6 group_8 FBDBKF_17020 32798 34489 -1 ilvB acetolactate synthase large subunit Morganella morganii S1
7 group_3520 FBDBKF_18280 18865 22455 1 nifJ pyruvate:ferredoxin (flavodoxin) oxidoreductase Morganella morganii S1
8 group_8 EHELCC_05685 128274 129995 -1 ilvI acetolactate synthase 3 large subunit Morganella morganii S2
9 group_262 EHELCC_06015 207136 208785 1 pDC1 TPP-dependent 2-oxoacid decarboxylase, includes indolepyruvate decarboxylase Morganella morganii S2
10 group_1884 EHELCC_08195 106156 107826 1 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase Morganella morganii S2
11 group_2908 EHELCC_08555 188663 190291 1 mdlC benzoylformate decarboxylase Morganella morganii S2
12 group_8 EHELCC_13370 156717 158375 -1 ilvG acetolactate synthase 2 catalytic subunit Morganella morganii S2
13 group_1616 EHELCC_14995 98604 100325 1 poxB ubiquinone-dependent pyruvate dehydrogenase Morganella morganii S2
14 group_8 EHELCC_16570 34021 35712 1 ilvB acetolactate synthase large subunit Morganella morganii S2
15 group_3520 EHELCC_18315 18738 22328 1 nifJ pyruvate:ferredoxin (flavodoxin) oxidoreductase Morganella morganii S2
16 group_8 NLDBIP_06005 169339 171060 -1 ilvI acetolactate synthase 3 large subunit Morganella morganii S4
17 group_262 NLDBIP_06335 248201 249850 1 pDC1 TPP-dependent 2-oxoacid decarboxylase, includes indolepyruvate decarboxylase Morganella morganii S4
18 group_1884 NLDBIP_08520 106156 107826 1 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase Morganella morganii S4
19 group_2908 NLDBIP_08880 188663 190291 1 mdlC benzoylformate decarboxylase Morganella morganii S4
20 group_8 NLDBIP_13705 156717 158375 -1 ilvG acetolactate synthase 2 catalytic subunit Morganella morganii S4
21 group_1616 NLDBIP_14825 98604 100325 1 poxB ubiquinone-dependent pyruvate dehydrogenase Morganella morganii S4
22 group_8 NLDBIP_16780 34021 35712 1 ilvB acetolactate synthase large subunit Morganella morganii S4
23 group_3520 NLDBIP_18240 18939 22529 1 nifJ pyruvate:ferredoxin (flavodoxin) oxidoreductase Morganella morganii S4
24 group_8 LHKJJB_02885 146863 148584 -1 ilvI acetolactate synthase 3 large subunit Morganella morganii S3
25 group_262 LHKJJB_03215 225725 227374 1 pDC1 TPP-dependent 2-oxoacid decarboxylase, includes indolepyruvate decarboxylase Morganella morganii S3
26 group_2908 LHKJJB_05385 66868 68496 -1 mdlC benzoylformate decarboxylase Morganella morganii S3
27 group_1884 LHKJJB_05745 149333 151003 -1 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase Morganella morganii S3
28 group_8 LHKJJB_12850 4068 5726 1 ilvG acetolactate synthase 2 catalytic subunit Morganella morganii S3
29 group_1616 LHKJJB_14520 41401 43122 -1 poxB ubiquinone-dependent pyruvate dehydrogenase Morganella morganii S3
30 group_8 LHKJJB_16690 32798 34489 -1 ilvB acetolactate synthase large subunit Morganella morganii S3
31 group_3520 LHKJJB_18435 18777 22367 1 nifJ pyruvate:ferredoxin (flavodoxin) oxidoreductase Morganella morganii S3
32 group_1884 HKOGLL_05170 90747 92417 1 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylic-acid synthase Morganella morganii S5
33 group_2908 HKOGLL_05530 173254 174882 1 mdlC benzoylformate decarboxylase Morganella morganii S5
34 group_8 HKOGLL_06360 68727 70448 -1 ilvI acetolactate synthase 3 large subunit Morganella morganii S5
35 group_262 HKOGLL_06690 147589 149238 1 pDC1 TPP-dependent 2-oxoacid decarboxylase, includes indolepyruvate decarboxylase Morganella morganii S5
36 group_8 HKOGLL_12180 156717 158375 -1 ilvG acetolactate synthase 2 catalytic subunit Morganella morganii S5
37 group_1616 HKOGLL_13140 41401 43122 -1 poxB ubiquinone-dependent pyruvate dehydrogenase Morganella morganii S5
38 group_8 HKOGLL_17655 32798 34489 -1 ilvB acetolactate synthase large subunit Morganella morganii S5
39 group_3520 HKOGLL_18170 18755 22345 1 nifJ pyruvate:ferredoxin (flavodoxin) oxidoreductase Morganella morganii S5
40 group_1884 F4V73_RS02850 603598 605268 1 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase Morganella psychrotolerans
41 group_2908 F4V73_RS03220 687129 688757 1 mdlC benzoylformate decarboxylase Morganella psychrotolerans
42 group_8 F4V73_RS08840 1829945 1831666 -1 ilvI acetolactate synthase 3 large subunit Morganella psychrotolerans
43 group_262 F4V73_RS09200 1926899 1928548 1 thiamine pyrophosphate-binding protein Morganella psychrotolerans
44 group_1616 F4V73_RS14370 101597 103318 1 poxB ubiquinone-dependent pyruvate dehydrogenase Morganella psychrotolerans
45 group_8 F4V73_RS18480 31430 33121 -1 ilvB acetolactate synthase large subunit Morganella psychrotolerans
46 group_8 F4V73_RS18690 4316 5962 1 ilvG acetolactate synthase 2 catalytic subunit Morganella psychrotolerans
47 group_262 PMI_RS01075 266036 267673 1 thiamine pyrophosphate-binding protein Proteus mirabilis HI4320
48 group_262 PMI_RS04150 932540 934189 -1 thiamine pyrophosphate-binding protein Proteus mirabilis HI4320
49 group_8 PMI_RS05145 1123899 1125578 -1 alsS acetolactate synthase AlsS Proteus mirabilis HI4320
50 group_1616 PMI_RS15995 3553868 3555592 1 poxB ubiquinone-dependent pyruvate dehydrogenase Proteus mirabilis HI4320
51 group_8 PMI_RS16400 3615947 3617596 1 ilvG acetolactate synthase 2 catalytic subunit Proteus mirabilis HI4320
52 group_8 PMI_RS17490 3838730 3840424 1 ilvB acetolactate synthase large subunit Proteus mirabilis HI4320