Orthogroup:group_414


Homologs in group_414

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8 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17985 FBDBKF_17985 Morganella morganii S1 - Fimbrial protein
EHELCC_06350 EHELCC_06350 Morganella morganii S2 - Fimbrial protein
NLDBIP_06670 NLDBIP_06670 Morganella morganii S4 - Fimbrial protein
LHKJJB_19270 LHKJJB_19270 Morganella morganii S3 - Fimbrial protein
HKOGLL_04720 HKOGLL_04720 Morganella morganii S5 - Fimbrial protein
PMI_RS02650 PMI_RS02650 Proteus mirabilis HI4320 ucaA uroepithelial cell adherence major pilin UcaA
PMI_RS05160 PMI_RS05160 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS12930 PMI_RS12930 Proteus mirabilis HI4320 - fimbrial protein

Distribution of group_414 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_414 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_414

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_414.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 7
2 ucaA 1

Product

# Product Occurence
1 Fimbrial protein 5
2 uroepithelial cell adherence major pilin UcaA 1
3 fimbrial protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3539 8 N Cell motility (N) Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07345 1 major type 1 subunit fimbrin (pilin) Shigellosis
Pertussis		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00419 1 Fimbrial protein
PF16970 7 Type-1 fimbrial protein, A

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG042619 1 uroepithelial cell adherence major pilin UcaA VF1235 Adherence

Annotations of the 49 SwissProt hits

Annotation Number of occurrences
F107 fimbrial protein 1
F17 fimbrial protein 1
Fimbria A protein 1
Fimbria adhesin protein 1
Fimbrial adapter PapK 2
Fimbrial protein 987P 1
Fimbrial protein FimX 1
Fimbrial subunit ElfA 1
Fimbrial subunit type 1 3
Fimbrin-like protein FimI 2
K99 fimbrial protein 1
Laminin-binding fimbrial subunit ElfA 1
Long polar fimbria protein A 1
Major MR/P fimbria protein 1
Major fimbrial subunit 5
Major fimbrial subunit SMF-1 1
Minor fimbrial subunit HifD 2
PRS fimbrial major pilin protein (Fragment) 1
Probable major fimbrial subunit LpfA 1
Protein FhaE 1
Protein FimA 1
Protein FimF 1
S-fimbrial adhesin protein SfaS 1
S-fimbrial protein subunit SfaA 1
Serotype 2 fimbrial subunit 1
Serotype 3 fimbrial subunit 1
Type-1 fimbrial protein subunit 1
Type-1 fimbrial protein, A chain 4
Type-1 fimbrial protein, C chain 2
Uncharacterized fimbrial-like protein SfmA 2
Uncharacterized fimbrial-like protein SfmF 1
Uncharacterized fimbrial-like protein YcbV 1
Uncharacterized fimbrial-like protein YdeS 1
Uncharacterized fimbrial-like protein YgiL 1
Uncharacterized fimbrial-like protein YraH 1

Protein length

Min length 136
Max length 181
Mean length (sd) 146.1 (18.9)
Median length 136.0

Protein length distribution