PF01590


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01590, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 22 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01590
Description GAF domain

Occurence in the database

PF01590 is associated with 22 different proteins (see tab "Protein list" and "Profile")
The 22 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2530 FBDBKF_02315 150962 152485 -1 norR nitric oxide reductase transcriptional regulator NorR Morganella morganii S1
1 group_786 FBDBKF_03640 130988 132595 1 fhlA FhlA-type transcriptional regulator, contains GAF, AAA-type ATPase, and DNA-binding Fis domains Morganella morganii S1
2 group_1090 FBDBKF_06200 67842 70088 -1 ptsP phosphoenolpyruvate--protein phosphotransferase Morganella morganii S1
3 group_2530 EHELCC_02785 538782 540305 -1 norR nitric oxide reductase transcriptional regulator NorR Morganella morganii S2
4 group_786 EHELCC_06895 114508 116115 -1 fhlA FhlA-type transcriptional regulator, contains GAF, AAA-type ATPase, and DNA-binding Fis domains Morganella morganii S2
5 group_1090 EHELCC_09245 68414 70660 -1 ptsP phosphoenolpyruvate--protein phosphotransferase Morganella morganii S2
6 group_2530 NLDBIP_00675 139831 141354 1 norR nitric oxide reductase transcriptional regulator NorR Morganella morganii S4
7 group_786 NLDBIP_07220 114381 115988 -1 fhlA FhlA-type transcriptional regulator, contains GAF, AAA-type ATPase, and DNA-binding Fis domains Morganella morganii S4
8 group_1090 NLDBIP_09625 68414 70660 -1 ptsP phosphoenolpyruvate--protein phosphotransferase Morganella morganii S4
9 group_2530 LHKJJB_01360 251331 252854 -1 norR nitric oxide reductase transcriptional regulator NorR Morganella morganii S3
10 group_786 LHKJJB_06755 78127 79734 -1 fhlA FhlA-type transcriptional regulator, contains GAF, AAA-type ATPase, and DNA-binding Fis domains Morganella morganii S3
11 group_1090 LHKJJB_08130 146578 148824 1 ptsP phosphoenolpyruvate--protein phosphotransferase Morganella morganii S3
12 group_2530 HKOGLL_01400 256842 258365 -1 norR nitric oxide reductase transcriptional regulator NorR Morganella morganii S5
13 group_786 HKOGLL_04175 153653 155260 1 fhlA FhlA-type transcriptional regulator, contains GAF, AAA-type ATPase, and DNA-binding Fis domains Morganella morganii S5
14 group_1090 HKOGLL_07680 146578 148824 1 ptsP phosphoenolpyruvate--protein phosphotransferase Morganella morganii S5
15 group_585 F4V73_RS04025 851912 852409 1 GAF domain-containing protein Morganella psychrotolerans
16 group_2530 F4V73_RS04690 989312 990832 -1 norR nitric oxide reductase transcriptional regulator NorR Morganella psychrotolerans
17 group_786 F4V73_RS11225 386033 387670 -1 sigma 54-interacting transcriptional regulator Morganella psychrotolerans
18 group_1090 F4V73_RS15715 144526 146772 1 ptsP phosphoenolpyruvate--protein phosphotransferase Morganella psychrotolerans
19 group_585 PMI_RS04925 1077230 1077727 1 GAF domain-containing protein Proteus mirabilis HI4320
20 group_1090 PMI_RS11475 2527264 2529510 -1 ptsP phosphoenolpyruvate--protein phosphotransferase Proteus mirabilis HI4320
21 group_786 PMI_RS17810 3913195 3914808 -1 sigma 54-interacting transcriptional regulator Proteus mirabilis HI4320