Homologs in group_585

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01695 FBDBKF_01695 64.2 Morganella morganii S1 msrC GAF domain-containing protein, putative methionine-R-sulfoxide reductase
EHELCC_02165 EHELCC_02165 64.2 Morganella morganii S2 msrC GAF domain-containing protein, putative methionine-R-sulfoxide reductase
NLDBIP_01295 NLDBIP_01295 64.2 Morganella morganii S4 msrC GAF domain-containing protein, putative methionine-R-sulfoxide reductase
LHKJJB_00740 LHKJJB_00740 64.2 Morganella morganii S3 msrC GAF domain-containing protein, putative methionine-R-sulfoxide reductase
HKOGLL_00780 HKOGLL_00780 64.2 Morganella morganii S5 msrC GAF domain-containing protein, putative methionine-R-sulfoxide reductase
F4V73_RS04025 F4V73_RS04025 64.2 Morganella psychrotolerans - GAF domain-containing protein

Distribution of the homologs in the orthogroup group_585

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_585

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76270 2.02e-64 197 58 0 159 1 msrC Free methionine-R-sulfoxide reductase Escherichia coli (strain K12)
O34553 2.71e-52 167 55 1 147 3 ytsP Protein YtsP Bacillus subtilis (strain 168)
O66116 8.94e-45 147 47 1 148 3 ZMO0507 Protein ZMO0507 Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
Q8MTJ7 4.8e-42 140 52 2 142 3 gafA GAF domain-containing protein A Dictyostelium discoideum
P36088 9.53e-32 115 42 3 148 1 YKL069W Free methionine-R-sulfoxide reductase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04925
Feature type CDS
Gene -
Product GAF domain-containing protein
Location 1077230 - 1077727 (strand: 1)
Length 498 (nucleotides) / 165 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_585
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF01590 GAF domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1956 Defense mechanisms (V)
Signal transduction mechanisms (T)		 VT GAF domain-containing protein, putative methionine-R-sulfoxide reductase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08968 L-methionine (R)-S-oxide reductase [EC:1.8.4.14] Cysteine and methionine metabolism
Metabolic pathways		 -

Protein Sequence

MPQLNFYQELTDNLSALLSGENDFIASLANTSALIYEKLDKINWVGFYLNDGNSLVLGPFQGKVACVRIGFGKGVCGTAFSENKILRVNDVHQFSGHIACDSASQSEIVLPLEVNGQIIGVLDIDSPIFGRFDKKDENGLKALCDVLCEHLKTCHTAKYCEFCVR

Flanking regions ( +/- flanking 50bp)

ATATGTTATCTATTTTAGTTATGCTTTCGTTATGCAAATAGGATCTTCTGATGCCACAATTAAATTTTTATCAGGAACTCACTGATAATTTGTCAGCCTTGTTGTCTGGTGAAAATGACTTTATCGCATCACTTGCTAATACCAGTGCATTGATTTACGAGAAGTTAGACAAGATAAATTGGGTCGGGTTTTATCTTAATGATGGTAACTCATTAGTTCTTGGTCCTTTCCAAGGTAAAGTGGCTTGTGTCAGGATTGGTTTTGGAAAAGGAGTCTGCGGAACGGCATTCTCAGAAAACAAAATTCTAAGAGTTAATGATGTGCACCAATTTAGTGGACACATTGCATGTGATAGTGCAAGTCAGTCTGAAATTGTTCTACCTTTAGAGGTAAATGGACAAATTATCGGCGTTCTCGATATCGATAGCCCTATTTTTGGTCGTTTTGATAAAAAAGATGAAAATGGGCTTAAAGCGTTGTGTGACGTGCTCTGCGAGCATTTAAAAACGTGTCATACCGCAAAATATTGTGAATTTTGTGTAAGATAACAGGCGTTTGCCGTAGAAATTGTTGGCAACACTATTATAATGTCGCTTGT