Homologs in group_585

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01695 FBDBKF_01695 90.9 Morganella morganii S1 msrC GAF domain-containing protein, putative methionine-R-sulfoxide reductase
EHELCC_02165 EHELCC_02165 90.9 Morganella morganii S2 msrC GAF domain-containing protein, putative methionine-R-sulfoxide reductase
NLDBIP_01295 NLDBIP_01295 90.9 Morganella morganii S4 msrC GAF domain-containing protein, putative methionine-R-sulfoxide reductase
LHKJJB_00740 LHKJJB_00740 90.9 Morganella morganii S3 msrC GAF domain-containing protein, putative methionine-R-sulfoxide reductase
HKOGLL_00780 HKOGLL_00780 90.9 Morganella morganii S5 msrC GAF domain-containing protein, putative methionine-R-sulfoxide reductase
PMI_RS04925 PMI_RS04925 64.2 Proteus mirabilis HI4320 - GAF domain-containing protein

Distribution of the homologs in the orthogroup group_585

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_585

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76270 1.41e-66 203 60 0 165 1 msrC Free methionine-R-sulfoxide reductase Escherichia coli (strain K12)
O34553 7.5e-51 163 55 1 148 3 ytsP Protein YtsP Bacillus subtilis (strain 168)
O66116 4.11e-41 138 44 1 152 3 ZMO0507 Protein ZMO0507 Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
Q8MTJ7 1.03e-37 129 51 2 132 3 gafA GAF domain-containing protein A Dictyostelium discoideum
P36088 5.32e-30 110 41 3 151 1 YKL069W Free methionine-R-sulfoxide reductase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04025
Feature type CDS
Gene -
Product GAF domain-containing protein
Location 851912 - 852409 (strand: 1)
Length 498 (nucleotides) / 165 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_585
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01590 GAF domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1956 Defense mechanisms (V)
Signal transduction mechanisms (T)		 VT GAF domain-containing protein, putative methionine-R-sulfoxide reductase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08968 L-methionine (R)-S-oxide reductase [EC:1.8.4.14] Cysteine and methionine metabolism
Metabolic pathways		 -

Protein Sequence

MNKIAFYQDLTRRLTSLISDEKDVIATLSNVSAVLFDELDNVNWAGFYLLQGDTLVLGPFQGKVACVRIPVGRGVCGTAVSEYRVIRVQDVHDFAGHIACDSASKSEIVLPLCVNNLIIGVLDIDSPIFNRFDNNDEIGLKALNDALCAHLATCVMPKYREMIAS

Flanking regions ( +/- flanking 50bp)

AATTAACCATTATCTTAGCTGGTGTATTAATCCGTAATATAGTGTGGTACATGAATAAAATTGCGTTTTATCAGGATTTGACCCGCCGTTTAACCTCGCTTATCAGCGATGAAAAAGATGTGATAGCGACACTGTCTAATGTCAGTGCCGTGCTTTTTGACGAGCTGGATAACGTAAACTGGGCGGGATTTTATCTTTTACAGGGTGACACTCTGGTATTGGGTCCCTTTCAGGGAAAAGTGGCGTGTGTCCGTATTCCTGTCGGACGGGGAGTCTGCGGAACGGCGGTGTCTGAATACCGGGTAATCCGTGTACAGGATGTACACGATTTTGCCGGCCATATCGCGTGTGATTCAGCCAGTAAATCAGAAATTGTGTTACCTCTGTGTGTAAATAATCTGATTATTGGTGTATTGGATATCGACAGCCCGATTTTTAATCGTTTTGATAATAATGATGAAATCGGCCTTAAAGCCTTGAATGACGCGCTCTGCGCACATCTGGCAACGTGCGTTATGCCAAAATATCGTGAAATGATCGCAAGTTAGGCTCACAGGAGCATAGCATTTGTCTGCAACACTATTATAATGTCGCCTGT