PF01435


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01435, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 28 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01435
Description Peptidase family M48

Occurence in the database

PF01435 is associated with 28 different proteins (see tab "Protein list" and "Profile")
The 28 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_369 FBDBKF_13490 76328 77209 -1 htpX protease HtpX Morganella morganii S1
1 group_1839 FBDBKF_13625 102984 104447 1 bepA Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains Morganella morganii S1
2 group_2929 FBDBKF_14215 41627 43678 -1 htpX Zn-dependent protease with chaperone function Morganella morganii S1
3 group_2343 FBDBKF_18805 8307 9059 1 htpX Zn-dependent protease with chaperone function Morganella morganii S1
4 group_2929 EHELCC_08065 73307 75358 1 htpX Zn-dependent protease with chaperone function Morganella morganii S2
5 group_1839 EHELCC_08470 170744 172207 -1 bepA Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains Morganella morganii S2
6 group_369 EHELCC_08605 197982 198863 1 htpX protease HtpX Morganella morganii S2
7 group_2343 EHELCC_17000 8308 9060 1 htpX Zn-dependent protease with chaperone function Morganella morganii S2
8 group_2929 NLDBIP_08390 73307 75358 1 htpX Zn-dependent protease with chaperone function Morganella morganii S4
9 group_1839 NLDBIP_08795 170744 172207 -1 bepA Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains Morganella morganii S4
10 group_369 NLDBIP_08930 197982 198863 1 htpX protease HtpX Morganella morganii S4
11 group_2343 NLDBIP_18380 8307 9059 1 htpX Zn-dependent protease with chaperone function Morganella morganii S4
12 group_369 LHKJJB_05335 58296 59177 -1 htpX protease HtpX Morganella morganii S3
13 group_1839 LHKJJB_05470 84952 86415 1 bepA Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains Morganella morganii S3
14 group_2929 LHKJJB_05875 181801 183852 -1 htpX Zn-dependent protease with chaperone function Morganella morganii S3
15 group_2343 LHKJJB_09245 183270 184022 -1 htpX Zn-dependent protease with chaperone function Morganella morganii S3
16 group_2929 HKOGLL_05040 57898 59949 1 htpX Zn-dependent protease with chaperone function Morganella morganii S5
17 group_1839 HKOGLL_05445 155335 156798 -1 bepA Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains Morganella morganii S5
18 group_369 HKOGLL_05580 182573 183454 1 htpX protease HtpX Morganella morganii S5
19 group_2343 HKOGLL_08795 183270 184022 -1 htpX Zn-dependent protease with chaperone function Morganella morganii S5
20 group_2929 F4V73_RS02695 567074 569152 1 M48 family metallopeptidase Morganella psychrotolerans
21 group_1839 F4V73_RS03125 667409 668872 -1 M48 family metallopeptidase Morganella psychrotolerans
22 group_369 F4V73_RS03265 696774 697658 1 htpX protease HtpX Morganella psychrotolerans
23 group_2343 F4V73_RS13790 390909 391661 -1 M48 family metallopeptidase Morganella psychrotolerans
24 group_369 PMI_RS00805 203036 204001 -1 htpX zinc metalloprotease HtpX Proteus mirabilis HI4320
25 group_369 PMI_RS04945 1083232 1084110 1 htpX protease HtpX Proteus mirabilis HI4320
26 group_1839 PMI_RS07640 1665635 1667107 1 M48 family metallopeptidase Proteus mirabilis HI4320
27 group_2343 PMI_RS17980 3950433 3951185 -1 M48 family metallopeptidase Proteus mirabilis HI4320