PF01435
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01435, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains
within the database. 28 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.
Description
External link |
PF01435 |
Description |
Peptidase family M48 |
Occurence in the database
PF01435 is associated with 28 different proteins (see tab "Protein list" and "Profile") |
The 28 proteins are classified into 4 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_369 |
FBDBKF_13490 |
76328 |
77209 |
-1 |
htpX |
protease HtpX |
Morganella morganii S1 |
1 |
group_1839 |
FBDBKF_13625 |
102984 |
104447 |
1 |
bepA |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains |
Morganella morganii S1 |
2 |
group_2929 |
FBDBKF_14215 |
41627 |
43678 |
-1 |
htpX |
Zn-dependent protease with chaperone function |
Morganella morganii S1 |
3 |
group_2343 |
FBDBKF_18805 |
8307 |
9059 |
1 |
htpX |
Zn-dependent protease with chaperone function |
Morganella morganii S1 |
4 |
group_2929 |
EHELCC_08065 |
73307 |
75358 |
1 |
htpX |
Zn-dependent protease with chaperone function |
Morganella morganii S2 |
5 |
group_1839 |
EHELCC_08470 |
170744 |
172207 |
-1 |
bepA |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains |
Morganella morganii S2 |
6 |
group_369 |
EHELCC_08605 |
197982 |
198863 |
1 |
htpX |
protease HtpX |
Morganella morganii S2 |
7 |
group_2343 |
EHELCC_17000 |
8308 |
9060 |
1 |
htpX |
Zn-dependent protease with chaperone function |
Morganella morganii S2 |
8 |
group_2929 |
NLDBIP_08390 |
73307 |
75358 |
1 |
htpX |
Zn-dependent protease with chaperone function |
Morganella morganii S4 |
9 |
group_1839 |
NLDBIP_08795 |
170744 |
172207 |
-1 |
bepA |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains |
Morganella morganii S4 |
10 |
group_369 |
NLDBIP_08930 |
197982 |
198863 |
1 |
htpX |
protease HtpX |
Morganella morganii S4 |
11 |
group_2343 |
NLDBIP_18380 |
8307 |
9059 |
1 |
htpX |
Zn-dependent protease with chaperone function |
Morganella morganii S4 |
12 |
group_369 |
LHKJJB_05335 |
58296 |
59177 |
-1 |
htpX |
protease HtpX |
Morganella morganii S3 |
13 |
group_1839 |
LHKJJB_05470 |
84952 |
86415 |
1 |
bepA |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains |
Morganella morganii S3 |
14 |
group_2929 |
LHKJJB_05875 |
181801 |
183852 |
-1 |
htpX |
Zn-dependent protease with chaperone function |
Morganella morganii S3 |
15 |
group_2343 |
LHKJJB_09245 |
183270 |
184022 |
-1 |
htpX |
Zn-dependent protease with chaperone function |
Morganella morganii S3 |
16 |
group_2929 |
HKOGLL_05040 |
57898 |
59949 |
1 |
htpX |
Zn-dependent protease with chaperone function |
Morganella morganii S5 |
17 |
group_1839 |
HKOGLL_05445 |
155335 |
156798 |
-1 |
bepA |
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains |
Morganella morganii S5 |
18 |
group_369 |
HKOGLL_05580 |
182573 |
183454 |
1 |
htpX |
protease HtpX |
Morganella morganii S5 |
19 |
group_2343 |
HKOGLL_08795 |
183270 |
184022 |
-1 |
htpX |
Zn-dependent protease with chaperone function |
Morganella morganii S5 |
20 |
group_2929 |
F4V73_RS02695 |
567074 |
569152 |
1 |
|
M48 family metallopeptidase |
Morganella psychrotolerans |
21 |
group_1839 |
F4V73_RS03125 |
667409 |
668872 |
-1 |
|
M48 family metallopeptidase |
Morganella psychrotolerans |
22 |
group_369 |
F4V73_RS03265 |
696774 |
697658 |
1 |
htpX |
protease HtpX |
Morganella psychrotolerans |
23 |
group_2343 |
F4V73_RS13790 |
390909 |
391661 |
-1 |
|
M48 family metallopeptidase |
Morganella psychrotolerans |
24 |
group_369 |
PMI_RS00805 |
203036 |
204001 |
-1 |
htpX |
zinc metalloprotease HtpX |
Proteus mirabilis HI4320 |
25 |
group_369 |
PMI_RS04945 |
1083232 |
1084110 |
1 |
htpX |
protease HtpX |
Proteus mirabilis HI4320 |
26 |
group_1839 |
PMI_RS07640 |
1665635 |
1667107 |
1 |
|
M48 family metallopeptidase |
Proteus mirabilis HI4320 |
27 |
group_2343 |
PMI_RS17980 |
3950433 |
3951185 |
-1 |
|
M48 family metallopeptidase |
Proteus mirabilis HI4320 |