Orthogroup:group_2377


Homologs in group_2377

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19135 FBDBKF_19135 Morganella morganii S1 rpsM 30S ribosomal protein S13
EHELCC_18880 EHELCC_18880 Morganella morganii S2 rpsM 30S ribosomal protein S13
NLDBIP_18895 NLDBIP_18895 Morganella morganii S4 rpsM 30S ribosomal protein S13
LHKJJB_18750 LHKJJB_18750 Morganella morganii S3 rpsM 30S ribosomal protein S13
HKOGLL_18485 HKOGLL_18485 Morganella morganii S5 rpsM 30S ribosomal protein S13
F4V73_RS19030 F4V73_RS19030 Morganella psychrotolerans rpsM 30S ribosomal protein S13
PMI_RS16255 PMI_RS16255 Proteus mirabilis HI4320 rpsM 30S ribosomal protein S13

Distribution of group_2377 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_2377 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2377

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_2377.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rpsM 7

Product

# Product Occurence
1 30S ribosomal protein S13 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0099 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein S13

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02952 7 small subunit ribosomal protein S13 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00416 7 Ribosomal protein S13/S18

Annotations of the 543 SwissProt hits

Annotation Number of occurrences
Small ribosomal subunit protein uS13 543

Protein length

Unique protein length 118

Protein length distribution