Homologs in group_1839

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13625 FBDBKF_13625 91.0 Morganella morganii S1 bepA Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains
EHELCC_08470 EHELCC_08470 91.0 Morganella morganii S2 bepA Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains
NLDBIP_08795 NLDBIP_08795 91.0 Morganella morganii S4 bepA Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains
LHKJJB_05470 LHKJJB_05470 91.0 Morganella morganii S3 bepA Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains
HKOGLL_05445 HKOGLL_05445 91.0 Morganella morganii S5 bepA Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains
PMI_RS07640 PMI_RS07640 59.5 Proteus mirabilis HI4320 - M48 family metallopeptidase

Distribution of the homologs in the orthogroup group_1839

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1839

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZCC3 0.0 551 56 1 458 3 bepA Beta-barrel assembly-enhancing protease Yersinia pestis
P66950 0.0 541 57 4 484 3 bepA Beta-barrel assembly-enhancing protease Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P66951 0.0 541 57 4 484 3 bepA Beta-barrel assembly-enhancing protease Salmonella typhi
P66949 0.0 535 57 4 484 3 bepA Beta-barrel assembly-enhancing protease Shigella flexneri
P66948 0.0 535 57 4 484 1 bepA Beta-barrel assembly-enhancing protease Escherichia coli (strain K12)
Q8XAD2 0.0 535 57 4 484 3 bepA Beta-barrel assembly-enhancing protease Escherichia coli O157:H7
Q9KQ40 1.78e-136 405 45 0 469 3 VC_2164 Putative beta-barrel assembly-enhancing protease Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q9FLI5 1.7e-08 60 28 4 130 2 OMA1 Mitochondrial metalloendopeptidase OMA1 Arabidopsis thaliana
P36163 6.19e-08 58 29 5 175 1 OMA1 Mitochondrial metalloendopeptidase OMA1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9P7G4 8.08e-08 57 23 4 205 3 oma1 Mitochondrial metalloendopeptidase OMA1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
E9QBI7 4.31e-07 55 25 11 272 3 oma1 Metalloendopeptidase OMA1, mitochondrial Danio rerio
Q5A663 4.61e-07 55 24 6 197 3 OMA1 Mitochondrial metalloendopeptidase OMA1 Candida albicans (strain SC5314 / ATCC MYA-2876)
Q3SZN3 3.98e-05 49 27 5 183 2 OMA1 Metalloendopeptidase OMA1, mitochondrial Bos taurus
D3ZS74 0.000535 46 27 7 180 1 Oma1 Metalloendopeptidase OMA1, mitochondrial Rattus norvegicus

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS03125
Feature type CDS
Gene -
Product M48 family metallopeptidase
Location 667409 - 668872 (strand: -1)
Length 1464 (nucleotides) / 487 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1839
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01435 Peptidase family M48
PF14559 Tetratricopeptide repeat

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4784 General function prediction only (R) R Putative Zn-dependent protease

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01423 beta-barrel assembly-enhancing protease [EC:3.4.-.-] - -

Protein Sequence

MNSFLKKPLAALLAVILTLPTLPVAHAAIEDALPEIGTTAGGTLSIGQENLMGDFYLRMIRSSSPMVYDPVLLQYVNTLGQKLVSNADAVKTPFNFFLIANPNINAFAFFGGNVVLHTSLFRYSLTESELASVMAHEIAHVTQRHLARMMEDQKNKAPLAWAATLGSILLLMTGTPVGAAAMTSTMAGIQQNMISFTQSNEQEADRIGMGTLSRSGFDPQGMPDFMTIMVDMSRYSSKPPEMLLTHPLPDSRLADARNRANQMTRKNPPQSLDFLLARARAMSMYGGQPLRNATDQMIDNYSKGNSKEQMAADYARAILLYRDNKYDAASQILTKLLAAEPNNVWFIDVMTDVDIGLNKTQSAVTRLENAIKRDPGNPVYRINLGNAYIQNKQYDKATKILRNYTFDYPSDPSGWDLLAEAGGKAGHRADELAARAEYQNLMGDFDGSVRSLTEASRQTKLNSYDQARYDARIDQIRQLQMQFKQFK

Flanking regions ( +/- flanking 50bp)

ATGATACACGAATTATTACCAGTGATAATTAACGGGGAAGACGTCATCCTATGAATTCGTTTCTGAAAAAACCGTTAGCAGCCTTATTGGCTGTCATCCTGACATTACCGACGCTGCCTGTTGCGCATGCCGCCATTGAGGATGCACTACCGGAAATCGGCACAACCGCCGGAGGCACACTCAGTATCGGGCAGGAAAACCTGATGGGCGATTTTTATCTGCGGATGATACGCAGTAGCTCACCAATGGTCTATGATCCTGTTTTACTGCAATATGTTAACACCCTCGGGCAAAAATTAGTCTCCAACGCCGATGCGGTAAAAACCCCGTTTAATTTCTTTCTGATAGCCAATCCGAATATCAACGCCTTTGCCTTCTTCGGCGGCAATGTGGTGCTGCACACCTCACTGTTCCGCTACAGTCTGACGGAAAGCGAGCTCGCCTCAGTAATGGCGCACGAAATTGCTCACGTAACCCAGCGCCACCTTGCCCGCATGATGGAAGATCAAAAAAATAAAGCCCCGCTGGCCTGGGCGGCAACACTTGGTTCAATTCTGCTGCTGATGACCGGAACGCCCGTCGGGGCGGCAGCGATGACATCAACAATGGCAGGAATTCAGCAAAATATGATCAGTTTTACTCAGTCAAATGAGCAGGAAGCTGACCGTATCGGCATGGGAACGCTGAGCCGTTCCGGATTTGACCCGCAGGGGATGCCGGATTTCATGACCATTATGGTGGATATGTCCCGCTACAGCTCCAAACCACCGGAAATGCTGTTAACTCACCCCCTGCCGGACAGCAGGCTTGCTGATGCGCGTAACCGTGCCAACCAGATGACCCGTAAAAATCCGCCGCAATCACTTGATTTTCTGCTCGCCCGCGCCCGGGCAATGAGTATGTACGGCGGACAGCCCCTGCGTAATGCCACCGATCAAATGATAGACAATTACAGCAAGGGCAACAGTAAAGAACAGATGGCCGCGGATTACGCGCGGGCAATTTTGCTGTACCGCGACAATAAATATGATGCGGCCTCGCAAATTCTGACAAAACTTCTGGCGGCAGAGCCCAATAATGTCTGGTTTATTGATGTCATGACGGATGTCGATATCGGACTGAATAAAACACAATCCGCCGTCACCCGGCTGGAAAATGCCATAAAGCGGGACCCGGGAAATCCGGTTTACCGGATTAACCTCGGCAATGCCTATATTCAGAATAAACAGTATGATAAGGCAACAAAAATCCTGCGCAATTATACCTTTGATTATCCGTCTGACCCGAGCGGCTGGGATTTACTGGCAGAAGCAGGCGGTAAAGCCGGGCATCGCGCTGATGAACTCGCCGCCCGCGCGGAATACCAGAACTTAATGGGTGATTTTGACGGCTCTGTCCGCAGCCTGACCGAAGCCAGCCGCCAGACAAAGCTCAACAGTTATGACCAGGCGCGTTATGATGCGCGGATTGACCAAATCCGCCAGTTACAGATGCAATTCAAACAATTTAAATAATCAATGAGGAAAACCATGACAGACACAGTCACCATCTGGCATAACCCGCG