PF00483


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00483, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 15 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00483
Description Nucleotidyl transferase

Occurence in the database

PF00483 is associated with 15 different proteins (see tab "Protein list" and "Profile")
The 15 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_272 FBDBKF_05360 81156 82061 -1 galU UTP--glucose-1-phosphate uridylyltransferase GalU Morganella morganii S1
1 group_1333 FBDBKF_08245 27477 28358 1 rfbA glucose-1-phosphate thymidylyltransferase RfbA Morganella morganii S1
2 group_272 EHELCC_12230 99433 100338 1 galU UTP--glucose-1-phosphate uridylyltransferase GalU Morganella morganii S2
3 group_1333 EHELCC_13280 135367 136248 -1 rfbA glucose-1-phosphate thymidylyltransferase RfbA Morganella morganii S2
4 group_272 NLDBIP_12570 99388 100293 1 galU UTP--glucose-1-phosphate uridylyltransferase GalU Morganella morganii S4
5 group_1333 NLDBIP_13620 135367 136248 -1 rfbA glucose-1-phosphate thymidylyltransferase RfbA Morganella morganii S4
6 group_272 LHKJJB_12430 99433 100338 1 galU UTP--glucose-1-phosphate uridylyltransferase GalU Morganella morganii S3
7 group_1333 LHKJJB_12935 26195 27076 1 rfbA glucose-1-phosphate thymidylyltransferase RfbA Morganella morganii S3
8 group_272 HKOGLL_11045 99433 100338 1 galU UTP--glucose-1-phosphate uridylyltransferase GalU Morganella morganii S5
9 group_1333 HKOGLL_12095 135367 136248 -1 rfbA glucose-1-phosphate thymidylyltransferase RfbA Morganella morganii S5
10 group_272 F4V73_RS05815 1238065 1238970 -1 galU UTP--glucose-1-phosphate uridylyltransferase GalU Morganella psychrotolerans
11 group_1333 F4V73_RS18795 28638 29519 1 rfbA glucose-1-phosphate thymidylyltransferase RfbA Morganella psychrotolerans
12 group_272 PMI_RS07215 1580586 1581491 -1 galU UTP--glucose-1-phosphate uridylyltransferase GalU Proteus mirabilis HI4320
13 group_272 PMI_RS15355 3410065 3411027 1 galU UTP--glucose-1-phosphate uridylyltransferase GalU Proteus mirabilis HI4320
14 group_1333 PMI_RS16505 3640871 3641752 1 rfbA glucose-1-phosphate thymidylyltransferase RfbA Proteus mirabilis HI4320