Orthogroup:group_1389


Homologs in group_1389

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08575 FBDBKF_08575 Morganella morganii S1 mdh malate dehydrogenase
EHELCC_12950 EHELCC_12950 Morganella morganii S2 mdh malate dehydrogenase
NLDBIP_13290 NLDBIP_13290 Morganella morganii S4 mdh malate dehydrogenase
LHKJJB_13265 LHKJJB_13265 Morganella morganii S3 mdh malate dehydrogenase
HKOGLL_11765 HKOGLL_11765 Morganella morganii S5 mdh malate dehydrogenase
F4V73_RS09800 F4V73_RS09800 Morganella psychrotolerans mdh malate dehydrogenase
PMI_RS16925 PMI_RS16925 Proteus mirabilis HI4320 mdh malate dehydrogenase

Distribution of group_1389 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1389 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1389

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1389.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 mdh 7

Product

# Product Occurence
1 malate dehydrogenase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0039 7 C Energy production and conversion (C) Malate/lactate dehydrogenase

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00056 7 lactate/malate dehydrogenase, NAD binding domain
PF02866 7 lactate/malate dehydrogenase, alpha/beta C-terminal domain

Annotations of the 528 SwissProt hits

Annotation Number of occurrences
L-2-hydroxycarboxylate dehydrogenase (NAD(P)(+)) 1
L-lactate dehydrogenase 81
L-lactate dehydrogenase 1 27
L-lactate dehydrogenase 2 12
L-lactate dehydrogenase 3 5
L-lactate dehydrogenase A 1
L-lactate dehydrogenase A chain 4
L-lactate dehydrogenase A-like 6A 1
L-lactate dehydrogenase B (Fragment) 1
L-lactate dehydrogenase C chain 1
Malate dehydrogenase 347
Malate dehydrogenase (Fragment) 7
Malate dehydrogenase (Fragments) 1
Malate dehydrogenase 1 3
Malate dehydrogenase 1, glyoxysomal 1
Malate dehydrogenase 1, mitochondrial 1
Malate dehydrogenase 1, peroxisomal 1
Malate dehydrogenase 2 3
Malate dehydrogenase 2, glyoxysomal 1
Malate dehydrogenase 2, mitochondrial 1
Malate dehydrogenase 2, peroxisomal 1
Malate dehydrogenase, chloroplastic 1
Malate dehydrogenase, cytoplasmic 2
Malate dehydrogenase, glyoxysomal 4
Malate dehydrogenase, mitochondrial 16
Malate dehydrogenase, mitochondrial (Fragment) 1
Malate dehydrogenase, peroxisomal 1
Probable L-lactate dehydrogenase 1
Probable malate dehydrogenase 1

Protein length

Unique protein length 312

Protein length distribution