Orthogroup:group_250


Homologs in group_250

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03365 FBDBKF_03365 Morganella morganii S1 accC acetyl-CoA carboxylase biotin carboxylase subunit
EHELCC_07170 EHELCC_07170 Morganella morganii S2 accC acetyl-CoA carboxylase biotin carboxylase subunit
NLDBIP_07495 NLDBIP_07495 Morganella morganii S4 accC acetyl-CoA carboxylase biotin carboxylase subunit
LHKJJB_07030 LHKJJB_07030 Morganella morganii S3 accC acetyl-CoA carboxylase biotin carboxylase subunit
HKOGLL_03900 HKOGLL_03900 Morganella morganii S5 accC acetyl-CoA carboxylase biotin carboxylase subunit
F4V73_RS11565 F4V73_RS11565 Morganella psychrotolerans accC acetyl-CoA carboxylase biotin carboxylase subunit
PMI_RS17705 PMI_RS17705 Proteus mirabilis HI4320 - biotin carboxylase N-terminal domain-containing protein
PMI_RS18045 PMI_RS18045 Proteus mirabilis HI4320 accC acetyl-CoA carboxylase biotin carboxylase subunit

Distribution of group_250 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_250 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_250

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_250.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 accC 7
2 - 1

Product

# Product Occurence
1 acetyl-CoA carboxylase biotin carboxylase subunit 7
2 biotin carboxylase N-terminal domain-containing protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4770 8 I Lipid transport and metabolism (I) Acetyl/propionyl-CoA carboxylase, alpha subunit

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00289 8 Biotin carboxylase, N-terminal domain
PF00364 1 Biotin-requiring enzyme
PF02785 8 Biotin carboxylase C-terminal domain
PF02786 8 Carbamoyl-phosphate synthase L chain, ATP binding domain

Annotations of the 436 SwissProt hits

Annotation Number of occurrences
2-oxoglutarate carboxylase large subunit 1
2-oxoglutarate carboxylase small subunit 1
Acetyl-CoA carboxylase 4
Acetyl-CoA carboxylase 1 7
Acetyl-CoA carboxylase 2 4
Acetyl-CoA carboxylase dmxL1 1
Acetyl-CoA carboxylase, mitochondrial 5
Alpha-aminoadipate--LysW ligase LysX 1
Bifunctional purine biosynthetic protein ADE1 1
Biotin carboxylase 7
Biotin carboxylase 1 1
Biotin carboxylase 1, chloroplastic 1
Biotin carboxylase 2 1
Biotin carboxylase 2, chloroplastic 1
Biotin carboxylase, chloroplastic 1
Biotin-dependent 3-methylcrotonyl-coenzyme A carboxylase alpha1 subunit 3
Biotin-dependent acyl-coenzyme A carboxylase alpha3 subunit 2
Biotin/lipoyl attachment protein 1
Biotinylated protein TB7.3 3
Biotinylated protein TB7.3 homolog 1
Carbamoyl phosphate synthase arginine-specific large chain 7
Carbamoyl phosphate synthase arginine-specific large chain, chloroplastic 2
Carbamoyl phosphate synthase arginine-specific large chain, mitochondrial 2
Carbamoyl phosphate synthase large chain 230
Carbamoyl phosphate synthase large chain (Fragment) 1
Carbamoyl phosphate synthase large chain, C-terminal section 3
Carbamoyl phosphate synthase large chain, N-terminal section 3
Carbamoyl phosphate synthase pyrimidine-specific large chain 4
Carbamoyl-phosphate synthase 1
Carbamoyl-phosphate synthase [ammonia], mitochondrial 3
D-alanine--D-alanine ligase 29
D-alanine--D-alanine ligase A 2
D-alanine--D-alanine ligase B 1
Formate-dependent phosphoribosylglycinamide formyltransferase 28
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial 7
Methylmalonyl-CoA decarboxylase subunit gamma 1
Multifunctional protein CAD 4
Multifunctional protein URA2 1
Multifunctional protein pyr-3 1
Multifunctional protein pyr1-3 1
Multifunctional protein pyrABCN 1
Multifunctional protein r 1
Multifunctional protein ura1 1
N5-carboxyaminoimidazole ribonucleotide synthase 12
Oxaloacetate decarboxylase alpha chain 2
Phosphoribosylamine--glycine ligase 5
Phosphoribosylaminoimidazole carboxylase 3
Propionyl-CoA carboxylase alpha chain 1
Propionyl-CoA carboxylase alpha chain (Fragment) 1
Propionyl-CoA carboxylase alpha chain, mitochondrial 6
Propionyl-CoA carboxylase, biotin carboxylase and biotin-carboxyl carrier subunit 1
Putative urea carboxylase 1
Pyruvate carboxylase 8
Pyruvate carboxylase 1 2
Pyruvate carboxylase 2 1
Pyruvate carboxylase subunit A 3
Pyruvate carboxylase subunit B 2
Pyruvate carboxylase, mitochondrial 4
Uncharacterized protein y4rH 1
Urea amidolyase 2

Protein length

Min length 449
Max length 581
Mean length (sd) 465.5 (46.7)
Median length 449.0

Protein length distribution