PF00460

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF00460
Protein list: lists the 36 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF00460
Description Flagella basal body rod protein

Occurence in the database

PF00460 is associated with 36 different proteins
The 36 proteins are classified into 6 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_545 FBDBKF_00690 115858 116640 -1 flgG flagellar basal-body rod protein FlgG Morganella morganii S1
1 group_546 FBDBKF_00695 116660 117415 -1 flgF Flagellar basal body rod protein FlgF Morganella morganii S1
2 group_547 FBDBKF_00700 117437 118648 -1 flgE flagellar hook protein FlgE Morganella morganii S1
3 group_549 FBDBKF_00710 119496 119900 -1 flgC flagellar basal body rod protein FlgC Morganella morganii S1
4 group_550 FBDBKF_00715 119906 120322 -1 flgB flagellar basal body rod protein FlgB Morganella morganii S1
5 group_550 EHELCC_00830 188546 188962 1 flgB flagellar basal body rod protein FlgB Morganella morganii S2
6 group_549 EHELCC_00835 188968 189372 1 flgC flagellar basal body rod protein FlgC Morganella morganii S2
7 group_547 EHELCC_00845 190220 191431 1 flgE flagellar hook protein FlgE Morganella morganii S2
8 group_546 EHELCC_00850 191453 192208 1 flgF Flagellar basal body rod protein FlgF Morganella morganii S2
9 group_545 EHELCC_00855 192228 193010 1 flgG flagellar basal-body rod protein FlgG Morganella morganii S2
10 group_545 NLDBIP_02605 487126 487908 -1 flgG flagellar basal-body rod protein FlgG Morganella morganii S4
11 group_546 NLDBIP_02610 487928 488683 -1 flgF Flagellar basal body rod protein FlgF Morganella morganii S4
12 group_547 NLDBIP_02615 488705 489916 -1 flgE flagellar hook protein FlgE Morganella morganii S4
13 group_549 NLDBIP_02625 490764 491168 -1 flgC flagellar basal body rod protein FlgC Morganella morganii S4
14 group_550 NLDBIP_02630 491174 491590 -1 flgB flagellar basal body rod protein FlgB Morganella morganii S4
15 group_545 LHKJJB_04120 94367 95149 -1 flgG flagellar basal-body rod protein FlgG Morganella morganii S3
16 group_546 LHKJJB_04125 95169 95924 -1 flgF Flagellar basal body rod protein FlgF Morganella morganii S3
17 group_547 LHKJJB_04130 95946 97157 -1 flgE flagellar hook protein FlgE Morganella morganii S3
18 group_549 LHKJJB_04140 98005 98409 -1 flgC flagellar basal body rod protein FlgC Morganella morganii S3
19 group_550 LHKJJB_04145 98415 98831 -1 flgB flagellar basal body rod protein FlgB Morganella morganii S3
20 group_550 HKOGLL_02900 188751 189167 1 flgB flagellar basal body rod protein FlgB Morganella morganii S5
21 group_549 HKOGLL_02905 189173 189577 1 flgC flagellar basal body rod protein FlgC Morganella morganii S5
22 group_547 HKOGLL_02915 190425 191636 1 flgE flagellar hook protein FlgE Morganella morganii S5
23 group_546 HKOGLL_02920 191658 192413 1 flgF Flagellar basal body rod protein FlgF Morganella morganii S5
24 group_545 HKOGLL_02925 192433 193215 1 flgG flagellar basal-body rod protein FlgG Morganella morganii S5
25 group_545 F4V73_RS06700 1392686 1393468 -1 flgG flagellar basal-body rod protein FlgG Morganella psychrotolerans
26 group_546 F4V73_RS06705 1393488 1394243 -1 flagellar basal body rod protein FlgF Morganella psychrotolerans
27 group_547 F4V73_RS06710 1394259 1395473 -1 flgE flagellar hook protein FlgE Morganella psychrotolerans
28 group_549 F4V73_RS06720 1396345 1396749 -1 flgC flagellar basal body rod protein FlgC Morganella psychrotolerans
29 group_550 F4V73_RS06725 1396755 1397171 -1 flgB flagellar basal body rod protein FlgB Morganella psychrotolerans
30 group_541 PMI_RS08030 1755620 1757263 -1 flgK flagellar hook-associated protein FlgK Proteus mirabilis HI4320
31 group_545 PMI_RS08050 1760295 1761077 -1 flgG flagellar basal-body rod protein FlgG Proteus mirabilis HI4320
32 group_546 PMI_RS08055 1761097 1761852 -1 flagellar basal body rod protein FlgF Proteus mirabilis HI4320
33 group_547 PMI_RS08060 1761874 1763094 -1 flgE flagellar hook protein FlgE Proteus mirabilis HI4320
34 group_549 PMI_RS08070 1763930 1764334 -1 flgC flagellar basal body rod protein FlgC Proteus mirabilis HI4320
35 group_550 PMI_RS08075 1764340 1764753 -1 flgB flagellar basal body rod protein FlgB Proteus mirabilis HI4320