Orthogroup:group_547


Homologs in group_547

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01305 FBDBKF_01305 Morganella morganii S1 tssF type VI secretion system baseplate subunit TssF
EHELCC_00240 EHELCC_00240 Morganella morganii S2 tssF type VI secretion system baseplate subunit TssF
NLDBIP_03220 NLDBIP_03220 Morganella morganii S4 tssF type VI secretion system baseplate subunit TssF
LHKJJB_04735 LHKJJB_04735 Morganella morganii S3 tssF type VI secretion system baseplate subunit TssF
HKOGLL_02310 HKOGLL_02310 Morganella morganii S5 tssF type VI secretion system baseplate subunit TssF
F4V73_RS02365 F4V73_RS02365 Morganella psychrotolerans tssF type VI secretion system baseplate subunit TssF
PMI_RS03670 PMI_RS03670 Proteus mirabilis HI4320 tssF type VI secretion system baseplate subunit TssF

Distribution of group_547 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_547 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_547

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_547.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tssF 7

Product

# Product Occurence
1 type VI secretion system baseplate subunit TssF 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3519 7 U Intracellular trafficking, secretion, and vesicular transport (U) Type VI protein secretion system component VasA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11896 7 type VI secretion system protein ImpG - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF05947 7 Type VI secretion system, TssF

Annotations of the 1 SwissProt hits

Annotation Number of occurrences
Type VI secretion system component TssF1 1

Protein length

Min length 591
Max length 593
Mean length (sd) 592.7 (0.8)
Median length 593.0

Protein length distribution