Homologs in group_469

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00695 FBDBKF_00695 92.8 Morganella morganii S1 flgF Flagellar basal body rod protein FlgF
EHELCC_00850 EHELCC_00850 92.8 Morganella morganii S2 flgF Flagellar basal body rod protein FlgF
NLDBIP_02610 NLDBIP_02610 92.8 Morganella morganii S4 flgF Flagellar basal body rod protein FlgF
LHKJJB_04125 LHKJJB_04125 92.8 Morganella morganii S3 flgF Flagellar basal body rod protein FlgF
HKOGLL_02920 HKOGLL_02920 92.8 Morganella morganii S5 flgF Flagellar basal body rod protein FlgF
PMI_RS08055 PMI_RS08055 66.5 Proteus mirabilis HI4320 - flagellar basal body rod protein FlgF

Distribution of the homologs in the orthogroup group_469

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_469

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P16323 5.95e-89 266 53 0 251 1 flgF Flagellar basal-body rod protein FlgF Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P75938 2.51e-85 257 52 0 251 3 flgF Flagellar basal-body rod protein FlgF Escherichia coli (strain K12)
P57423 4.58e-50 167 36 3 246 3 flgF Flagellar basal-body rod protein FlgF Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8K9K5 3.16e-45 155 33 2 251 3 flgF Flagellar basal-body rod protein FlgF Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89AH8 1.85e-30 116 28 5 253 3 flgF Flagellar basal-body rod protein FlgF Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P57424 5.48e-19 86 29 8 252 3 flgG Flagellar basal-body rod protein FlgG Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P0ABX5 1.01e-18 85 30 9 270 3 flgG Flagellar basal-body rod protein FlgG Escherichia coli (strain K12)
P0ABX6 1.01e-18 85 30 9 270 3 flgG Flagellar basal-body rod protein FlgG Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ABX7 1.01e-18 85 30 9 270 3 flgG Flagellar basal-body rod protein FlgG Escherichia coli O157:H7
Q8K9K4 1.24e-18 85 30 6 246 3 flgG Flagellar basal-body rod protein FlgG Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P0A1J3 2.36e-18 84 30 9 270 1 flgG Flagellar basal-body rod protein FlgG Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1J4 2.36e-18 84 30 9 270 3 flgG Flagellar basal-body rod protein FlgG Salmonella typhi
Q89AH7 9.73e-18 83 30 8 257 3 flgG Flagellar basal-body rod protein FlgG Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q06171 5.26e-16 78 29 10 258 3 flgF Flagellar basal-body rod protein FlgF Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
P23446 1.01e-14 75 28 10 257 3 flgG Flagellar basal-body rod protein FlgG Bacillus subtilis (strain 168)
Q52946 1.41e-11 66 28 10 245 3 flgG Flagellar basal-body rod protein FlgG Rhizobium meliloti (strain 1021)
O51715 2.15e-11 65 27 10 269 3 flgG Flagellar basal-body rod protein FlgG Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
Q44338 3.68e-11 65 28 8 244 3 flgG Flagellar basal-body rod protein FlgG Agrobacterium fabrum (strain C58 / ATCC 33970)
Q06172 3.12e-10 62 25 7 265 3 flgG Flagellar basal-body rod protein FlgG Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q98HE3 8.9e-09 57 25 11 255 3 flgF Flagellar basal-body rod protein FlgF Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
P39752 2.47e-08 57 27 12 274 3 flhO Flagellar hook-basal body complex protein FlhO Bacillus subtilis (strain 168)
P39753 0.000817 43 24 12 246 3 flhP Flagellar hook-basal body complex protein FlhP Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06705
Feature type CDS
Gene -
Product flagellar basal body rod protein FlgF
Location 1393488 - 1394243 (strand: -1)
Length 756 (nucleotides) / 251 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_469
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00460 Flagella basal body rod protein
PF06429 Flagellar basal body rod FlgEFG protein C-terminal
PF22692 Flagellar hook protein FlgE/F/G D1 domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4787 Cell motility (N) N Flagellar basal body rod protein FlgF

Protein Sequence

MDHVIYTAMGGAKHALENQAIVSNNIANVSTSGFKAQLSAMRAVPVNGDTEQTRTLVVSTTPGADMSQGPLNYTGRSMDVSLNDGHFLAVALPGGDEAYTRNGNIQISADGQLMLGENLLQGDGGAIDVPPHAQLTIGGDGTITALIPTDPPTMLGQIGRLKMVEAKPQDVMRGEDGLFHLTPLARNTNGNALPMSERGKVMAGVLEGSNVNPAQAMVEMIANARHFEMQMKVVHSADENAQRANQLLAVS

Flanking regions ( +/- flanking 50bp)

ATCAGATGCTGCAAACATTGGTTAACTTACGCTAAGTACTGAGGGCGGTCATGGATCACGTTATTTATACGGCAATGGGTGGCGCTAAACATGCGCTGGAAAATCAGGCCATTGTCTCGAACAACATTGCCAACGTCTCAACGTCCGGGTTTAAAGCACAGTTATCCGCTATGCGCGCCGTTCCTGTCAATGGTGACACGGAACAGACCCGGACACTGGTGGTTTCCACAACACCCGGGGCGGACATGAGTCAGGGACCGCTCAATTATACCGGGCGATCAATGGATGTGTCGCTTAACGACGGACATTTTCTGGCTGTTGCACTGCCGGGCGGTGATGAAGCCTACACCCGTAACGGGAATATTCAGATTTCAGCCGATGGTCAGCTGATGCTGGGTGAAAACCTGTTACAGGGCGACGGCGGGGCGATTGATGTGCCTCCGCATGCACAGCTTACTATCGGCGGCGACGGAACCATTACGGCGCTCATCCCGACTGATCCACCGACGATGCTCGGGCAGATTGGTCGTCTGAAAATGGTGGAAGCGAAGCCGCAGGATGTGATGCGCGGTGAAGACGGGCTGTTTCATCTGACACCGCTTGCCCGTAACACCAACGGCAATGCATTGCCAATGAGTGAGCGCGGCAAAGTGATGGCGGGTGTGCTGGAAGGCAGTAATGTCAATCCGGCACAGGCGATGGTGGAGATGATAGCCAACGCACGCCATTTTGAGATGCAGATGAAAGTCGTCCACAGCGCGGATGAAAATGCCCAGCGGGCGAATCAGCTGCTGGCTGTAAGTTAATACTTAGTAAGGAATTATCATGATCCGTTCATTATGGATTGCAAAAACCG