Orthogroup:group_550


Homologs in group_550

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01320 FBDBKF_01320 Morganella morganii S1 tssJ type VI secretion system lipoprotein TssJ
EHELCC_00225 EHELCC_00225 Morganella morganii S2 tssJ type VI secretion system lipoprotein TssJ
NLDBIP_03235 NLDBIP_03235 Morganella morganii S4 tssJ type VI secretion system lipoprotein TssJ
LHKJJB_04750 LHKJJB_04750 Morganella morganii S3 tssJ type VI secretion system lipoprotein TssJ
HKOGLL_02295 HKOGLL_02295 Morganella morganii S5 tssJ type VI secretion system lipoprotein TssJ
F4V73_RS02350 F4V73_RS02350 Morganella psychrotolerans tssJ type VI secretion system lipoprotein TssJ
PMI_RS03655 PMI_RS03655 Proteus mirabilis HI4320 tssJ type VI secretion system lipoprotein TssJ

Distribution of group_550 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_550 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_550

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_550.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tssJ 7

Product

# Product Occurence
1 type VI secretion system lipoprotein TssJ 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3521 7 U Intracellular trafficking, secretion, and vesicular transport (U) Predicted component of the type VI protein secretion system

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11906 7 type VI secretion system protein VasD Bacterial secretion system -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF12790 7 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113

Protein length

Min length 179
Max length 183
Mean length (sd) 179.6 (1.5)
Median length 179.0

Protein length distribution