PF00383


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00383, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 22 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00383
Description Cytidine and deoxycytidylate deaminase zinc-binding region

Occurence in the database

PF00383 is associated with 22 different proteins (see tab "Protein list" and "Profile")
The 22 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2568 FBDBKF_02735 244119 244577 -1 tadA tRNA(Arg) A34 adenosine deaminase TadA Morganella morganii S1
1 group_1181 FBDBKF_06810 25548 26432 -1 cdd cytidine deaminase Morganella morganii S1
2 group_2256 FBDBKF_17380 6687 7799 -1 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD Morganella morganii S1
3 group_2568 EHELCC_03205 631939 632397 -1 tadA tRNA(Arg) A34 adenosine deaminase TadA Morganella morganii S2
4 group_1181 EHELCC_04160 159754 160638 1 cdd cytidine deaminase Morganella morganii S2
5 group_2256 EHELCC_17275 6687 7799 -1 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD Morganella morganii S2
6 group_2568 NLDBIP_00255 47739 48197 1 tadA tRNA(Arg) A34 adenosine deaminase TadA Morganella morganii S4
7 group_1181 NLDBIP_04160 159550 160434 1 cdd cytidine deaminase Morganella morganii S4
8 group_2256 NLDBIP_17920 34997 36109 1 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD Morganella morganii S4
9 group_2568 LHKJJB_01780 344488 344946 -1 tadA tRNA(Arg) A34 adenosine deaminase TadA Morganella morganii S3
10 group_1181 LHKJJB_09990 159664 160548 1 cdd cytidine deaminase Morganella morganii S3
11 group_2256 LHKJJB_17840 34995 36107 1 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD Morganella morganii S3
12 group_2568 HKOGLL_01820 349999 350457 -1 tadA tRNA(Arg) A34 adenosine deaminase TadA Morganella morganii S5
13 group_1181 HKOGLL_08985 30504 31388 -1 cdd cytidine deaminase Morganella morganii S5
14 group_2256 HKOGLL_17850 34995 36107 1 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD Morganella morganii S5
15 group_1181 F4V73_RS00950 202296 203180 -1 cdd cytidine deaminase Morganella psychrotolerans
16 group_3826 F4V73_RS02875 609326 611116 -1 anti-phage dCTP deaminase Morganella psychrotolerans
17 group_2568 F4V73_RS05215 1110504 1110962 -1 nucleoside deaminase Morganella psychrotolerans
18 group_2256 F4V73_RS16555 130389 131498 -1 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD Morganella psychrotolerans
19 group_3826 F4V73_RS17810 9529 9984 -1 deaminase Morganella psychrotolerans
20 group_2256 PMI_RS00390 109413 110570 1 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD Proteus mirabilis HI4320
21 group_1181 PMI_RS03170 699839 700723 -1 cdd cytidine deaminase Proteus mirabilis HI4320