Orthogroup:group_192


Homologs in group_192

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9 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09205 FBDBKF_09205 Morganella morganii S1 gntR gluconate operon transcriptional repressor GntR
EHELCC_10205 EHELCC_10205 Morganella morganii S2 gntR gluconate operon transcriptional repressor GntR
NLDBIP_10550 NLDBIP_10550 Morganella morganii S4 gntR gluconate operon transcriptional repressor GntR
LHKJJB_10805 LHKJJB_10805 Morganella morganii S3 gntR gluconate operon transcriptional repressor GntR
HKOGLL_13865 HKOGLL_13865 Morganella morganii S5 gntR gluconate operon transcriptional repressor GntR
F4V73_RS10765 F4V73_RS10765 Morganella psychrotolerans gntR gluconate operon transcriptional repressor GntR
PMI_RS01410 PMI_RS01410 Proteus mirabilis HI4320 treR trehalose operon repressor TreR
PMI_RS08720 PMI_RS08720 Proteus mirabilis HI4320 - LacI family DNA-binding transcriptional regulator
PMI_RS13175 PMI_RS13175 Proteus mirabilis HI4320 gntR gluconate operon transcriptional repressor GntR

Distribution of group_192 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_192 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_192

Orthogroup content: 9 members

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This page summarizes the annotation of all members of the orthologous group group_192.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 gntR 7
2 treR 1
3 - 1

Product

# Product Occurence
1 gluconate operon transcriptional repressor GntR 7
2 trehalose operon repressor TreR 1
3 LacI family DNA-binding transcriptional regulator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1609 9 K Transcription (K) DNA-binding transcriptional regulator, LacI/PurR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03485 1 LacI family transcriptional regulator, trehalose operon repressor - -
K06145 7 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00356 9 Bacterial regulatory proteins, lacI family
PF00532 7 Periplasmic binding proteins and sugar binding domain of LacI family
PF13377 2 Periplasmic binding protein-like domain

Annotations of the 194 SwissProt hits

Annotation Number of occurrences
Arabinose metabolism transcriptional repressor 3
Catabolite control protein A 12
Catabolite control protein B 1
Catabolite repressor/activator 6
D-apiose import binding protein 3
D-ribose/D-allose-binding protein 1
Fructose operon regulatory protein 1
HTH-type transcriptional regulator AglR 1
HTH-type transcriptional regulator AscG 1
HTH-type transcriptional regulator CelR 1
HTH-type transcriptional regulator Cphy_2742 1
HTH-type transcriptional regulator DegA 1
HTH-type transcriptional regulator EbgR 1
HTH-type transcriptional regulator GalR 6
HTH-type transcriptional regulator GalS 2
HTH-type transcriptional regulator GanR 1
HTH-type transcriptional regulator GntR 3
HTH-type transcriptional regulator IdnR 1
HTH-type transcriptional regulator IpsA 1
HTH-type transcriptional regulator KdgR 1
HTH-type transcriptional regulator MalR 5
HTH-type transcriptional regulator PtxS 3
HTH-type transcriptional regulator RafR 1
HTH-type transcriptional regulator RegA 2
HTH-type transcriptional regulator TreR 2
HTH-type transcriptional regulator pepR1 1
HTH-type transcriptional regulator reg1 1
HTH-type transcriptional repressor CytR 4
HTH-type transcriptional repressor MelR 1
HTH-type transcriptional repressor PurR 88
Lactose operon repressor 1
Lactose operon repressor (Fragment) 2
Maltose regulon regulatory protein MalI 1
Maltose regulon regulatory protein MalI (Fragment) 1
NTD biosynthesis operon regulator NtdR 1
Probable HTH-type transcriptional regulator EndR 1
Probable HTH-type transcriptional repressor ExuR 1
Probable opine utilization operon repressor (Fragment) 1
Ribitol operon repressor 1
Ribose import binding protein RbsB 4
Ribose operon repressor 9
Sucrose operon repressor 9
Uncharacterized HTH-type transcriptional regulator SCO4158 1
Uncharacterized HTH-type transcriptional regulator YcjW 1
Uncharacterized HTH-type transcriptional regulator YkvZ 1
Uncharacterized HTH-type transcriptional regulator YvdE 1
Uncharacterized HTH-type transcriptional regulator in aml 5'region 1
Xylose operon regulatory protein 1

Protein length

Min length 322
Max length 348
Mean length (sd) 331.9 (6.7)
Median length 331.0

Protein length distribution