PF00364


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00364, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 22 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00364
Description Biotin-requiring enzyme

Occurence in the database

PF00364 is associated with 22 different proteins (see tab "Protein list" and "Profile")
The 22 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_754 FBDBKF_03360 73837 74298 1 accB acetyl-CoA carboxylase biotin carboxyl carrier protein Morganella morganii S1
1 group_839 FBDBKF_04230 32591 34474 -1 aceF pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase Morganella morganii S1
2 group_1518 FBDBKF_09815 57462 58673 -1 odhB 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase Morganella morganii S1
3 group_1518 EHELCC_04615 249427 250638 -1 odhB 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase Morganella morganii S2
4 group_839 EHELCC_05520 92048 93931 -1 aceF pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase Morganella morganii S2
5 group_754 EHELCC_07175 172805 173266 -1 accB acetyl-CoA carboxylase biotin carboxyl carrier protein Morganella morganii S2
6 group_1518 NLDBIP_04615 249223 250434 -1 odhB 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase Morganella morganii S4
7 group_839 NLDBIP_05840 133113 134996 -1 aceF pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase Morganella morganii S4
8 group_754 NLDBIP_07500 172678 173139 -1 accB acetyl-CoA carboxylase biotin carboxyl carrier protein Morganella morganii S4
9 group_839 LHKJJB_02720 110637 112520 -1 aceF pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase Morganella morganii S3
10 group_754 LHKJJB_07035 136424 136885 -1 accB acetyl-CoA carboxylase biotin carboxyl carrier protein Morganella morganii S3
11 group_1518 LHKJJB_14015 84944 86155 1 odhB 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase Morganella morganii S3
12 group_754 HKOGLL_03895 96502 96963 1 accB acetyl-CoA carboxylase biotin carboxyl carrier protein Morganella morganii S5
13 group_839 HKOGLL_06195 32501 34384 -1 aceF pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase Morganella morganii S5
14 group_1518 HKOGLL_12520 58243 59454 -1 odhB 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase Morganella morganii S5
15 group_1518 F4V73_RS00530 113830 115041 1 odhB 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase Morganella psychrotolerans
16 group_839 F4V73_RS08680 1793666 1795531 -1 aceF pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase Morganella psychrotolerans
17 group_754 F4V73_RS11570 464514 464975 -1 accB acetyl-CoA carboxylase biotin carboxyl carrier protein Morganella psychrotolerans
18 group_1518 PMI_RS02805 616607 617815 1 odhB 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase Proteus mirabilis HI4320
19 group_839 PMI_RS10080 2200787 2202652 -1 aceF pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase Proteus mirabilis HI4320
20 group_250 PMI_RS17705 3887200 3888945 1 biotin carboxylase N-terminal domain-containing protein Proteus mirabilis HI4320
21 group_754 PMI_RS18050 3965428 3965898 -1 accB acetyl-CoA carboxylase biotin carboxyl carrier protein Proteus mirabilis HI4320