Orthogroup:group_1567


Homologs in group_1567

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10155 FBDBKF_10155 Morganella morganii S1 nrdF class 1b ribonucleoside-diphosphate reductase subunit beta
EHELCC_04955 EHELCC_04955 Morganella morganii S2 nrdF class 1b ribonucleoside-diphosphate reductase subunit beta
NLDBIP_04955 NLDBIP_04955 Morganella morganii S4 nrdF class 1b ribonucleoside-diphosphate reductase subunit beta
LHKJJB_13675 LHKJJB_13675 Morganella morganii S3 nrdF class 1b ribonucleoside-diphosphate reductase subunit beta
HKOGLL_12860 HKOGLL_12860 Morganella morganii S5 nrdF class 1b ribonucleoside-diphosphate reductase subunit beta
F4V73_RS00185 F4V73_RS00185 Morganella psychrotolerans nrdF class 1b ribonucleoside-diphosphate reductase subunit beta
PMI_RS02035 PMI_RS02035 Proteus mirabilis HI4320 nrdF class 1b ribonucleoside-diphosphate reductase subunit beta

Distribution of group_1567 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1567 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1567

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1567.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nrdF 7

Product

# Product Occurence
1 class 1b ribonucleoside-diphosphate reductase subunit beta 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0208 7 F Nucleotide transport and metabolism (F) Ribonucleotide reductase beta subunit, ferritin-like domain

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00268 7 Ribonucleotide reductase, small chain

Annotations of the 74 SwissProt hits

Annotation Number of occurrences
Probable ribonucleoside-diphosphate reductase small subunit 048L 1
Probable ribonucleoside-diphosphate reductase small subunit 376L 1
R2-like ligand binding oxidase 2
Ribonucleoside-diphosphate reductase 1 subunit beta 3
Ribonucleoside-diphosphate reductase 2 subunit beta 2
Ribonucleoside-diphosphate reductase small chain 18
Ribonucleoside-diphosphate reductase small chain 1 1
Ribonucleoside-diphosphate reductase small chain A 1
Ribonucleoside-diphosphate reductase small chain B 1
Ribonucleoside-diphosphate reductase small chain C 1
Ribonucleoside-diphosphate reductase small subunit 8
Ribonucleoside-diphosphate reductase subunit M2 7
Ribonucleoside-diphosphate reductase subunit M2 B 4
Ribonucleoside-diphosphate reductase subunit beta 19
Ribonucleoside-diphosphate reductase subunit beta nrdF1 2
Ribonucleoside-diphosphate reductase subunit beta nrdF2 2
SPbeta prophage-derived ribonucleoside-diphosphate reductase subunit beta 1

Protein length

Min length 320
Max length 322
Mean length (sd) 320.3 (0.8)
Median length 320.0

Protein length distribution