PF00358


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00358, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 15 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00358
Description phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1

Occurence in the database

PF00358 is associated with 15 different proteins (see tab "Protein list" and "Profile")
The 15 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_328 FBDBKF_09915 78517 80547 -1 nagE Phosphotransferase system IIA component Morganella morganii S1
1 group_1667 FBDBKF_11590 113445 113954 -1 crr PTS glucose transporter subunit IIA Morganella morganii S1
2 group_328 EHELCC_04715 270482 272512 -1 nagE Phosphotransferase system IIA component Morganella morganii S2
3 group_1667 EHELCC_17510 11788 12297 -1 crr PTS glucose transporter subunit IIA Morganella morganii S2
4 group_328 NLDBIP_04715 270278 272308 -1 nagE Phosphotransferase system IIA component Morganella morganii S4
5 group_1667 NLDBIP_18720 12535 13044 -1 crr PTS glucose transporter subunit IIA Morganella morganii S4
6 group_328 LHKJJB_13915 63070 65100 1 nagE Phosphotransferase system IIA component Morganella morganii S3
7 group_1667 LHKJJB_17950 11788 12297 -1 crr PTS glucose transporter subunit IIA Morganella morganii S3
8 group_328 HKOGLL_12620 79298 81328 -1 nagE Phosphotransferase system IIA component Morganella morganii S5
9 group_1667 HKOGLL_18700 11934 12443 1 crr PTS glucose transporter subunit IIA Morganella morganii S5
10 group_328 F4V73_RS00435 92047 94083 1 nagE N-acetylglucosamine-specific PTS transporter subunit IIBC Morganella psychrotolerans
11 group_1667 F4V73_RS08090 1680218 1680727 1 crr PTS glucose transporter subunit IIA Morganella psychrotolerans
12 group_328 PMI_RS02280 524804 526849 1 nagE N-acetylglucosamine-specific PTS transporter subunit IIBC Proteus mirabilis HI4320
13 group_1667 PMI_RS09030 1967937 1968446 1 crr PTS glucose transporter subunit IIA Proteus mirabilis HI4320
14 group_198 PMI_RS10970 2414701 2416590 -1 beta-glucoside-specific PTS transporter subunit IIABC Proteus mirabilis HI4320