Orthogroup:group_406


Homologs in group_406

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09915 FBDBKF_09915 Morganella morganii S1 nagE Phosphotransferase system IIA component
EHELCC_04715 EHELCC_04715 Morganella morganii S2 nagE Phosphotransferase system IIA component
NLDBIP_04715 NLDBIP_04715 Morganella morganii S4 nagE Phosphotransferase system IIA component
LHKJJB_13915 LHKJJB_13915 Morganella morganii S3 nagE Phosphotransferase system IIA component
HKOGLL_12620 HKOGLL_12620 Morganella morganii S5 nagE Phosphotransferase system IIA component
F4V73_RS00435 F4V73_RS00435 Morganella psychrotolerans nagE N-acetylglucosamine-specific PTS transporter subunit IIBC
PMI_RS02280 PMI_RS02280 Proteus mirabilis HI4320 nagE N-acetylglucosamine-specific PTS transporter subunit IIBC

Distribution of group_406 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_406 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_406

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_406.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nagE 7

Product

# Product Occurence
1 Phosphotransferase system IIA component 5
2 N-acetylglucosamine-specific PTS transporter subunit IIBC 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1263 7 G Carbohydrate transport and metabolism (G) Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02804 7 N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] Amino sugar and nucleotide sugar metabolism
Phosphotransferase system (PTS)		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00358 7 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PF00367 7 phosphotransferase system, EIIB
PF02378 7 Phosphotransferase system, EIIC

Annotations of the 123 SwissProt hits

Annotation Number of occurrences
Lactose permease 4
PTS system MurNAc-GlcNAc-specific EIIBC component 9
PTS system N-acetylglucosamine-specific EIIB component 1
PTS system N-acetylglucosamine-specific EIIC component 1
PTS system N-acetylglucosamine-specific EIICB component 1
PTS system N-acetylglucosamine-specific EIICBA component 2
PTS system N-acetylmuramic acid-specific EIIBC component 13
PTS system alpha-glucoside-specific EIICB component 3
PTS system arbutin-, cellobiose-, and salicin-specific EIIBC component 1
PTS system beta-glucoside-specific EIIBCA component 4
PTS system glucosamine-specific EIICBA component 1
PTS system glucose-specific EIIA component 24
PTS system glucose-specific EIIBCA component 1
PTS system glucose-specific EIICB component 7
PTS system glucose-specific EIICBA component 24
PTS system glucose-specific EIICBA component (Fragment) 1
PTS system glucoside-specific EIICBA component 15
PTS system maltose-specific EIICB component 2
PTS system mannose-specific EIIBCA component 1
PTS system sucrose-specific EIIBCA component 2
Phosphotransferase IIC component GlvC 1
Phosphotransferase enzyme IIA component PtsA 1
Phosphotransferase enzyme IIB component GlvB 2
Putative phosphotransferase enzyme IIA component YyzE 1
Raffinose carrier protein 1

Protein length

Min length 676
Max length 681
Mean length (sd) 677.0 (1.9)
Median length 676.0

Protein length distribution