PF00324


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00324, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 35 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00324
Description Amino acid permease

Occurence in the database

PF00324 is associated with 35 different proteins (see tab "Protein list" and "Profile")
The 35 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_7 FBDBKF_00495 78213 79610 1 cycA D-serine/D-alanine/glycine transporter Morganella morganii S1
1 group_2711 FBDBKF_06745 11834 13186 -1 potE Serine transporter YbeC, amino acid:H+ symporter family Morganella morganii S1
2 group_1974 FBDBKF_14815 63910 65391 -1 lysP Amino acid permease Morganella morganii S1
3 group_7 FBDBKF_16420 7837 9243 1 ansP L-asparagine transporter or related permease Morganella morganii S1
4 group_7 FBDBKF_19025 21290 22651 1 proY L-asparagine transporter or related permease Morganella morganii S1
5 group_7 EHELCC_01050 229258 230655 -1 cycA D-serine/D-alanine/glycine transporter Morganella morganii S2
6 group_2711 EHELCC_04225 173000 174352 1 potE Serine transporter YbeC, amino acid:H+ symporter family Morganella morganii S2
7 group_7 EHELCC_08285 124823 126229 1 ansP L-asparagine transporter or related permease Morganella morganii S2
8 group_1974 EHELCC_15620 93986 95467 -1 lysP Amino acid permease Morganella morganii S2
9 group_7 EHELCC_18770 21290 22651 1 proY L-asparagine transporter or related permease Morganella morganii S2
10 group_7 NLDBIP_02410 449481 450878 1 cycA D-serine/D-alanine/glycine transporter Morganella morganii S4
11 group_2711 NLDBIP_04225 172796 174148 1 potE Serine transporter YbeC, amino acid:H+ symporter family Morganella morganii S4
12 group_7 NLDBIP_08610 124823 126229 1 ansP L-asparagine transporter or related permease Morganella morganii S4
13 group_1974 NLDBIP_16150 93986 95467 -1 lysP Amino acid permease Morganella morganii S4
14 group_7 NLDBIP_18535 2862 4223 -1 proY L-asparagine transporter or related permease Morganella morganii S4
15 group_7 LHKJJB_03925 56722 58119 1 cycA D-serine/D-alanine/glycine transporter Morganella morganii S3
16 group_7 LHKJJB_05655 130930 132336 -1 ansP L-asparagine transporter or related permease Morganella morganii S3
17 group_2711 LHKJJB_10055 172910 174262 1 potE Serine transporter YbeC, amino acid:H+ symporter family Morganella morganii S3
18 group_1974 LHKJJB_15690 21219 22700 1 lysP Amino acid permease Morganella morganii S3
19 group_7 LHKJJB_18640 21290 22651 1 proY L-asparagine transporter or related permease Morganella morganii S3
20 group_7 HKOGLL_03120 229463 230860 -1 cycA D-serine/D-alanine/glycine transporter Morganella morganii S5
21 group_7 HKOGLL_05260 109414 110820 1 ansP L-asparagine transporter or related permease Morganella morganii S5
22 group_2711 HKOGLL_08920 16790 18142 -1 potE Serine transporter YbeC, amino acid:H+ symporter family Morganella morganii S5
23 group_1974 HKOGLL_14810 20431 21912 1 lysP Amino acid permease Morganella morganii S5
24 group_7 HKOGLL_18375 21290 22651 1 proY L-asparagine transporter or related permease Morganella morganii S5
25 group_2711 F4V73_RS00895 188858 190210 -1 APC family permease Morganella psychrotolerans
26 group_7 F4V73_RS02940 623093 624493 1 amino acid permease Morganella psychrotolerans
27 group_7 F4V73_RS06505 1353653 1355050 1 cycA D-serine/D-alanine/glycine transporter Morganella psychrotolerans
28 group_1974 F4V73_RS07615 1593371 1594870 -1 amino acid permease Morganella psychrotolerans
29 group_7 F4V73_RS13930 421249 422685 1 amino acid permease Morganella psychrotolerans
30 group_1974 PMI_RS04130 922643 924130 1 amino acid permease Proteus mirabilis HI4320
31 group_1972 PMI_RS04140 927844 929223 1 APC family permease Proteus mirabilis HI4320
32 group_7 PMI_RS07785 1704951 1706333 -1 amino acid permease Proteus mirabilis HI4320
33 group_7 PMI_RS07880 1723634 1725046 -1 cycA D-serine/D-alanine/glycine transporter Proteus mirabilis HI4320
34 group_7 PMI_RS11100 2443092 2444459 1 amino acid permease Proteus mirabilis HI4320